| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1385 |
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| Symbol | secA |
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| ID | 4809380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1690794 |
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| End bp | 1693526 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640106809 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001037810 |
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| Protein GI | 125973900 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAG TATTCGAAAA AATATTTGGA AGTTATAGTG ATAGAGAGGT TAAGAGGATT
AAACCCATTA TTGACAGAAT AGAGGCTTTG GAACCGGAAA TGCAGGCATT GAGCGATGAA
CAGCTCAAAG CCAAGACACC TGAGTTTAAG AGGAGGCTCA GCCAGGGAGA AACTTTGGAT
GATCTTCTTC CGGAAGCTTT TGCTGTGGTA AGGGAAGCTT CAAGGAGAGT TTTGGGAATG
AGGCATTTCA GAGTTCAGCT TATTGGAGGA GTTGTCCTTC ACCAGGGAAG AATAGCGGAA
ATGAAAACTG GTGAAGGTAA GACCCTGGTT GCAACTTTGC CGGTGTATCT GAATGCTCTT
GAAGGCAAAG GGGTCCATGT TGTTACCGTA AATGACTATC TGGCAACCCG CGACAGTGAA
TGGATGGGGA AATTGTATAA TTTTCTTGGA CTGAGCGTGG GACTTATTGT TCACGGGCTT
ACCAATGAAG AGAGAAAGAA AGCCTACAGC TGTGATATAA CTTATGGAAC CAACAATGAG
TTTGGTTTTG ATTACCTTAG GGATAACATG GTTATTTACA AAGAGGACAT GGTTCAAAGG
GACCTTCACT TTGCCATCGT GGATGAGGTT GACAGTATTC TTATAGATGA GGCCAGGACA
CCGCTTATTA TTTCCGGTGT CGGGGATAAA TCCACGGATC TTTACACTAG AGCTGATGCT
TTTGTAAGAA GACTTAAAGT AAAAGTATTT ACCGAACTTG ACGACAAAGA GCAAACCGAT
GACATTGAGG CCGATTATAT TGTGGATGAA AAGGCAAATA CAGCAACTTT GACGGCCAGC
GGAGTGAAAA AGGCGGAAGA GTTTTTCGGT ATTCAAAACC TTTCGGATCC GGACAATATG
ACCATATCCC ACCATATAAA CCAGGCGCTG AGAGCCCACG GACTTATGAA GAGGGACAGG
GATTATGTGG TAAAAGATGA TCAGGTAATT ATTGTGGATG AGTTCACCGG CCGTCTTATG
TACGGAAGAA GGTACAGCAA CGGCCTTCAT CAGGCTATAG AGGCAAAAGA AGGGGTAAAG
GTTGAAAGAG AAAGCAAAAC CTTGGCGAGC ATTACATTCC AGAATTATTT CAGAATGTAC
AGGAAATTGT CCGGTATGAC AGGTACGGCC CAGACCGAGG AACAGGAATT CAGGAGCATC
TACAACCTGG ATGTTGTTGT AATACCTACA AACATGCCGG TAATCAGGGT GGACCATCCC
GACAGCGTGT ACAAGAATGA AAGAGGCAAG TTTAATGCTG TTATAAATCA GGTGATTGAG
TGCCACAAAA AAGGCCAGCC TGTATTGATA GGCACCATAT CTATTGAAAA ATCGGAGCTT
TTGAGTTCAA TGCTTAAAAG ACACGGTATT CCGCATCAAG TGTTAAATGC CAAATACCAT
GAAAAAGAAG CCGAAATAAT TGCCCAGGCC GGAAAACTTG GCGCCGTCAC CATTGCAACC
AACATGGCAG GTCGCGGTAC GGATATTCTT TTGGGCGGAA ACCCTGAATT TATGGCCAAG
CAGGAAATGA GAAAAAGAGG CTTCAGGGAA GATGTTATCA ATCAAGCCAC GGGATTCAAT
GATACCAATG ATCCGGAGAT TCTTGAAGCG AGAAAAGTGT ACCGCGAGCT TTATGAGGGA
TTCAAAAAAA TTACCGATGC TGAGAGGGAA AAGGTTGTTG CAGCCGGAGG ACTGTTTATC
ATAGGTACTG AAAGACACGA GTCGAGACGT ATAGACAATC AGCTCAGAGG ACGTGCGGGA
CGTCAGGGAG ACCCGGGAGA GTCAAGATTT TATATATCCC TGGAAGATGA TCTTATGCGT
CTTTTCGGTT CGGACAGACT CATGGGAATG GTTGAGGCAC TGGGCCTTGA AGAAGACCAG
CCTATTGAGC ATAAGATGCT GTCAAACGCC ATTGAAAATG CCCAAAAGAG AGTGGAGAGC
AGGAACTTTG CCATAAGAAA AAGCGTCCTT GAATACGATG ATGTTATGAA CAAGCAAAGA
GAAGTTATCT ACGCTCAAAG AAGAAAGGTG TTAAATGGCG AGAATCTCAA AGAAAACATC
GTAAAAATGA TGGAGAACAT TGCGGACTAT ATTGTAAATC TGTTCTGCAG TGAAAATCCG
CACCCGGATT TCTGGGACTG GGAAGGCATA AGGTCTTATA CTGAAAAGGC TTATGTTCCG
GAAGGAACCC TGGATTTTTC CAAAGAGCAG ATGGAGGATC TTAACAAAGA AAAGCTCAGA
CAAATAATAC TTGACAGCAT GCTCAAAAGA TATGAGGAAA AGGAAAAAGA ATTTGGTTCC
GAGCTTATGA GGGAGCTGGA GAGAGTTGTT CTTTTAAGAG TTGTGGACCA AAAATGGATG
GATCATATCG ACGACATGGA TCAGCTGCAG CATGGTGTAA GGCTTAGAGC TTACGGACAC
AAGGACCCTG TTATAGAGTA CAAGTTTGAA AGCTTTGAAA TGTTTGAAGA AATGAACAGA
AATATCCAGT CAGATGTAGT AAGGATAATA CTCAATACAC ATATTGACCG CAACCGTATG
CCACAGCGCC AAAAAGTGGC TGAACCGGTT ACTGCCTCCC ACGGAGAAGA AGTCAGAAAA
CCTGTGGTAA AAAGAAACAA GGTGGGACGA AATGAACTTT GCCCGTGCGG CAGCGGCAAG
AAATATAAAA AATGTTGCGG AATTGATGAA TAA
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| Protein sequence | MLKVFEKIFG SYSDREVKRI KPIIDRIEAL EPEMQALSDE QLKAKTPEFK RRLSQGETLD
DLLPEAFAVV REASRRVLGM RHFRVQLIGG VVLHQGRIAE MKTGEGKTLV ATLPVYLNAL
EGKGVHVVTV NDYLATRDSE WMGKLYNFLG LSVGLIVHGL TNEERKKAYS CDITYGTNNE
FGFDYLRDNM VIYKEDMVQR DLHFAIVDEV DSILIDEART PLIISGVGDK STDLYTRADA
FVRRLKVKVF TELDDKEQTD DIEADYIVDE KANTATLTAS GVKKAEEFFG IQNLSDPDNM
TISHHINQAL RAHGLMKRDR DYVVKDDQVI IVDEFTGRLM YGRRYSNGLH QAIEAKEGVK
VERESKTLAS ITFQNYFRMY RKLSGMTGTA QTEEQEFRSI YNLDVVVIPT NMPVIRVDHP
DSVYKNERGK FNAVINQVIE CHKKGQPVLI GTISIEKSEL LSSMLKRHGI PHQVLNAKYH
EKEAEIIAQA GKLGAVTIAT NMAGRGTDIL LGGNPEFMAK QEMRKRGFRE DVINQATGFN
DTNDPEILEA RKVYRELYEG FKKITDAERE KVVAAGGLFI IGTERHESRR IDNQLRGRAG
RQGDPGESRF YISLEDDLMR LFGSDRLMGM VEALGLEEDQ PIEHKMLSNA IENAQKRVES
RNFAIRKSVL EYDDVMNKQR EVIYAQRRKV LNGENLKENI VKMMENIADY IVNLFCSENP
HPDFWDWEGI RSYTEKAYVP EGTLDFSKEQ MEDLNKEKLR QIILDSMLKR YEEKEKEFGS
ELMRELERVV LLRVVDQKWM DHIDDMDQLQ HGVRLRAYGH KDPVIEYKFE SFEMFEEMNR
NIQSDVVRII LNTHIDRNRM PQRQKVAEPV TASHGEEVRK PVVKRNKVGR NELCPCGSGK
KYKKCCGIDE
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