| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1363 |
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| Symbol | |
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| ID | 4809358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1655927 |
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| End bp | 1657321 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640106787 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_001037788 |
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| Protein GI | 125973878 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000148306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGG ATGATATCTT GGAAATTGAT TTGCGGGAGA TAGTATATAT TCTTCTTAAG
AAGTGGTATC TCATTGTGTT GTGCTTTGTT CTATCAGCTG GCACAGCCTT TGTAGTTACT
CAATTTTATA TAAAACCGGT CTATAAAGCT GAAACAACAC TGTTTCTTGG TAAGGAGAAG
GATCAGGTTT CACTGAGCTT TTCCGATATA CAGGTAAATA ATCAACTTGT TGTGGACTAT
AGAGAGATAC TTCAATCAAG GCGTGTGGCA GAGATTATTA ATCAAAAGTT TGGAGTTGGA
ATACAGGAAT TTCAAAAAAA TGTAAACGTA AAAACAGTAA AAGATTCAAG ATTGTTCAGT
ATAAGCTATG AGGATACTGA TCCAAAACGT GCTGCTGACA TAGTAAATGA ACTGGCAACG
GTTATTCAGA AGATGGCAGA CGAGATTATA CAGGTCAAAA ATATTAAAGT TATAGATACT
GCGAAAATAC CGGAAAACCC TATAAAGCCT AATAAGAAAA TGAATATATG TGTGGCAGGA
TTGTTTGGTT TGGTATTGGG GATCGGATTG ATATTCTTAC TTGAATTGAT TGACCATACA
TTTAAGAAGC CGGAAGAAGT TGAAAAGATG CTTGGAATTA ATGTTATTGG TACAATCCCG
GCATTTGATG GCGGCAAACG AGGAAAGAAA AAAGCCAAGG ATGAAAAAGA ACTTCAAGAA
CAATACCTTA AAAATCTTAT TGTACATAAT AATCCAAAGT CAGCCACTGC CGAGGCGTTT
AGAGAGCTTC GCACAAATTT GTATTATTCA AGTGTAGACA GCGAAGTAAA GACTATAGTA
GTAACAAGTC CAACTCTCGG AGACGGCAAA ACGGTTACTG CTGTGAATCT TGCAATAACT
CTTGCACGTT CCGGCAAGAA AGTTCTTGTT ATAGATGCTG ACTTAAGAAA GCCAAAGGTT
CATCATTATT TTGGTGTGAA AAATAAAGAG GGTTTAACTA ATCTTTTAAC TGATTCAAAG
GAAGAAGTAA AAATTAAAAC AACAGAGAGA AGCGATATTT CAAATCTGTA TATAATTACA
AGTGGTCCGA TTCCGCCAAA TCCGGCAGAA ATGCTTAATT CAAACAGGAT GAAAAGCCTT
TTGGAAAAAG TACGGGAGGA ATATGATATT GTTATCATAG ACACTCCTCC GGTGGGGCAG
GTTACAGATG CAGCAATTCT TGCCGGAATT ACGGATGGAG TTATCCTTGT ATTGGCAAGT
GGCCAAACAA GAATAGAAAT GGCGAAGCGA GCTTTTAAAT CCCTTGAGAG TGTAAAAGCA
AGGTTTATTG GTGCAGTTCT TACGAAATTG GATACTGAAA GAACTGGTTA TTATTACAGT
TACAAGTATG AGTGA
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| Protein sequence | MEKDDILEID LREIVYILLK KWYLIVLCFV LSAGTAFVVT QFYIKPVYKA ETTLFLGKEK
DQVSLSFSDI QVNNQLVVDY REILQSRRVA EIINQKFGVG IQEFQKNVNV KTVKDSRLFS
ISYEDTDPKR AADIVNELAT VIQKMADEII QVKNIKVIDT AKIPENPIKP NKKMNICVAG
LFGLVLGIGL IFLLELIDHT FKKPEEVEKM LGINVIGTIP AFDGGKRGKK KAKDEKELQE
QYLKNLIVHN NPKSATAEAF RELRTNLYYS SVDSEVKTIV VTSPTLGDGK TVTAVNLAIT
LARSGKKVLV IDADLRKPKV HHYFGVKNKE GLTNLLTDSK EEVKIKTTER SDISNLYIIT
SGPIPPNPAE MLNSNRMKSL LEKVREEYDI VIIDTPPVGQ VTDAAILAGI TDGVILVLAS
GQTRIEMAKR AFKSLESVKA RFIGAVLTKL DTERTGYYYS YKYE
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