| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1345 |
|---|
| Symbol | |
|---|
| ID | 4809485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1637576 |
|---|
| End bp | 1638091 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640106769 |
|---|
| Product | adenine phosphoribosyltransferase |
|---|
| Protein accession | YP_001037770 |
|---|
| Protein GI | 125973860 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
|---|
| TIGRFAM ID | [TIGR01090] adenine phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000290871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA AAGCTAAACT AAGAGAAGTG CCGGATTTCC CGAAGGAAGG TATAAACTTT
ATTGATATTA CCACCGTACT TCAGGATCCT GAGGCTCTAA AAGAGTGCAT TGATTCCATG
AAAAAGAAGG TAGAGTCCTT TGGGGAGTTT GACATTATTG TTGGAGCTGA ATCCAGAGGA
TTCATCTTTG GGGCACCGCT GGCATATGCA TTGGGAAAAG GTTTTGTACC TATCAGGAAA
AAGGGAAAGC TTCCGTACAA GACAATCAGT GTTGAATATG AGCTTGAGTA TGGCACGGAC
ATACTTGAGA TGCATATAGA TGCAATTAAA AAGGGTCAAA GGGTGGTTAT CGTAGATGAC
CTTCTTGCAA CGGGAGGAAC TACAAAATCG AATATAAAGC TTGTGGAACA GTTGGGAGGA
GAAATTCTGG GAATAGTTTA TTTTGTTGAA CTTACTTTCT TAAACGGAAG AGAAAAATTG
AAAGGCTACA ATGTTGAGTC CATAGTCCAA TATTAA
|
|---|
| Protein sequence | MDLKAKLREV PDFPKEGINF IDITTVLQDP EALKECIDSM KKKVESFGEF DIIVGAESRG
FIFGAPLAYA LGKGFVPIRK KGKLPYKTIS VEYELEYGTD ILEMHIDAIK KGQRVVIVDD
LLATGGTTKS NIKLVEQLGG EILGIVYFVE LTFLNGREKL KGYNVESIVQ Y
|
|---|
| |