Gene Cthe_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1343 
Symbol 
ID4809483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1634745 
End bp1635194 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content42% 
IMG OID640106767 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001037768 
Protein GI125973858 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00244031 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCGG TTGTACAGAG AGTAACATTC TCCAAAGTTA CGGTTGAAGG TGAAATAGTC 
GGAGAAATAG GAAAAGGTCT TACGGTACTT TTGGGTGTGG GGTGCGATGA CACCGAAAAA 
GATGTTGAGT ACCTTGCAGA CAAAATTGTA AATTTGAGGA TTTTTGAAGA TGAAAACGGA 
AAAATGAATC TGTCGCTAAA GGATGTAGGA GGGGAGCTTT TGGTTGTATC CCAGTTTACT 
CTTTACGGCG ATTGCAGAAA GGGAAAAAGA CCGAGTTTTG ACAGAGCGGC AAGGCCTGAT 
ACGGCAAAAG AACTCTATGA GAAATTTGTT GAGCTGTGCC GCAGCTATGA TGTGAAGGTT 
GAAACCGGTA AATTTCAGGC CATGATGATG GTGGAAATCC ATAATGACGG GCCTGTTACA 
ATGCTTATCG ACAGCAAAAA AGAATTTTAA
 
Protein sequence
MRAVVQRVTF SKVTVEGEIV GEIGKGLTVL LGVGCDDTEK DVEYLADKIV NLRIFEDENG 
KMNLSLKDVG GELLVVSQFT LYGDCRKGKR PSFDRAARPD TAKELYEKFV ELCRSYDVKV 
ETGKFQAMMM VEIHNDGPVT MLIDSKKEF