| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1339 |
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| Symbol | |
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| ID | 4809479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1629675 |
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| End bp | 1630913 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640106763 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001037764 |
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| Protein GI | 125973854 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTGG AAGAAAAAGA GAAGCTTATT GCTCAGATAA GAAAGCATAT AAGCGAAAAC
CTGGATTTGA GAAAGGACTT TTCGGATGAA GAAATAAAGG ACATTATTAC AAATGTTGTT
TTTGAAAGGT CAAGGGATTA TTACCTCAGC GTGGGGGAGA AGAAGGAAAT TGCCGATGCG
ATTTTTAATT CCATGAGAAG GCTGGATGTT CTTCAACCCC TCATTGATGA CAAAAGTATT
ACTGAAATAA TGATAAACGG CCCGGACTCA ATATTTATTG AAAGGGACGG AAGAGTCTCA
AAATTGAACG TAAAATTTGA AAGTCGACGC AAGCTGGAGG ACGTAATTCA GACTATTGTA
TCAAGGGTGA ACAGGACGGT AAATGAGGCG TCTCCGATTG TTGATGCCAG GTTGCCGGAC
GGTTCCCGTG TAAACGTGGT TTTACCGCCG ATAGCTTTAA ACGGGCCTGT GGTTACCATA
AGAAAGTTTC CGGAAAAACC GATGACGATA GAGCAGCTTA TAAAATACGG TTCAATCACC
GAGGAAGTTG CTGAAGTGCT GGAGAGGCTG GTTAAAGCAA AATATAATAT ATTTATCTGC
GGAGGTACGG GCTCGGGAAA AACCACATTT TTGAATGCTC TTAGCAATTT TATTCCGAAG
GACGAGAGAA TTGTTACAAT AGAAGACTCG GCAGAGCTTC AGATTACCGG GGTGGAGAAC
ATTGTCAGGC TGGAAACAAG GAATGCCAAT ACGGAGGGAA AGGGAGAGAT TACAATCAGG
GATCTCATAA GAACTTCACT TCGTATGAGG CCGGAGAGAA TTATTGTGGG TGAGGTGCGT
GGAAAAGAGG CACTCGACAT GCTTCAGGCG ATGAATACCG GACATGACGG TTCCCTTTCC
ACCGGACACG CAAACTCCAC AAAGGACATG CTTTCAAGGC TTGAAACCAT GGTGCTGAGC
GGTGCCGAAA TGCCTTTGGA GGCTATCAGA CAACAAATAG CTTCTGCGAT AGATATAATT
ATTCATTTGG GAAGGCTCAG GGATAAATCG AGAAGAACCC TTGAGATTAC AGAGGTTGTG
GAATACAAGA ATGGGCAGAT TGTTCTAAAT CCGCTTTATG AGTTTGTCGA AGAGGGGGAA
ACTCCGGAAA AACAGGTGAT TGGCACCTTG AGAAGAACAA AGAATGAAAT GGTGAACAAA
CTCAAATTCA AGATGGCGGG TATATCCGAC AAGTTTTAA
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| Protein sequence | MELEEKEKLI AQIRKHISEN LDLRKDFSDE EIKDIITNVV FERSRDYYLS VGEKKEIADA
IFNSMRRLDV LQPLIDDKSI TEIMINGPDS IFIERDGRVS KLNVKFESRR KLEDVIQTIV
SRVNRTVNEA SPIVDARLPD GSRVNVVLPP IALNGPVVTI RKFPEKPMTI EQLIKYGSIT
EEVAEVLERL VKAKYNIFIC GGTGSGKTTF LNALSNFIPK DERIVTIEDS AELQITGVEN
IVRLETRNAN TEGKGEITIR DLIRTSLRMR PERIIVGEVR GKEALDMLQA MNTGHDGSLS
TGHANSTKDM LSRLETMVLS GAEMPLEAIR QQIASAIDII IHLGRLRDKS RRTLEITEVV
EYKNGQIVLN PLYEFVEEGE TPEKQVIGTL RRTKNEMVNK LKFKMAGISD KF
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