| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1331 |
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| Symbol | aspS |
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| ID | 4809471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1619327 |
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| End bp | 1621114 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640106755 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001037756 |
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| Protein GI | 125973846 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.175841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGAAT CTATTTATGG ATTGAAAAGG ACGCATATGT GCGCCGAACT TACCGTGAAT
GATGTCGGAA AGACCGTTAC GGTTATGGGA TGGTGCCACA AAAGCAGGAA TCTTGGTGGG
TTAATTTTTG TTACATTAAG AGACAGAACC GGTATAATCC AGGTAGTGTT TGACAACACG
GTAAATTCCG AACTTTTTGC AAAAGCTGAG GGAATCAGAG GCGAATACGT GCTTGCCGTG
GTGGGAGAAG TGGTGAAAAG AAGCCCCGAG GCAATAAATC CCAAACTTCC CACAGGAGAA
ATTGAGATTA TTGCAAAGGA ATTGAGAATT CTCAGTACTG CCGAGTCACC ACCCATATAT
ATTGAAGAGG ATTCCGATGT AAACGAGGCC ACAAGGCTTA AGTACAGATA TCTTGATTTG
AGAAGACCTG ACATGCAGAG AAACCTGATG TTAAGGCACA GGGTGGCAAA GATTGCCAGA
GACTATTTTG ACGAGCACGG TTTTATTGAA ATAGAGACTC CGATGCTTAC CAAGAGCACT
CCCGAGGGGG CAAGAGACTA TCTTGTGCCA AGCAGGGTAC ATCCGGGGAA ATTTTTTGCG
CTGCCCCAGT CACCCCAGCT TTTCAAGCAG CTTTTGATGG TTGCAGGTTT TGACCGGTAT
ATGCAGATTG TAAAATGCTT CAGGGATGAG GACCTTAGAG CCGACAGGCA GCCTGAGTTT
ACACAGATAG ATTTGGAAAT GTCATTTGTA AATGTTGAGG ATGTGCTTAC CATAAATGAA
GGTTTTATAA AAAGGGTATT CAAGGAGGCT ATTAATGTCG ACCTTGAGAT ACCTTTCATA
AGGATGCCGT ATAAAGAGGC CATGGAGAGA TTTGGGACCG ACAAACCGGA TATAAGGTTT
GGATTTGAAC TGGTTAACCT GTCAGACCTT GTGGAAAACT GTGGCTTTAA GGTATTTTCC
GATGCCGTCA AAAACGGAGG AAGCGTTCGG GCGATAAATG CCAAAGGATG TGGAAATAAA
TTCAGCAGAA AGGAAATAGA TGCCCTTGGT GAATTCGTAA AAACCTATGG TGCAAAGGGA
ATGGCCTGGA TAGTTGTGGG AGAAAACGAG CATAAATCCC CGATTACCAA ATTCTTTACC
GAGGACGAAA TCAAGGCCGT TTTGACAAGA ATGCGGGCAG AACCCGGAGA CCTCATATGC
TTTATTGCCG ACAAAAATGA GGTTGTGTTC GATTCACTGG GACAGCTGAG AGTGGAAATA
GCAAGAAAGC TGGGATTGCT TGACAACAAG GAATTTAAAT TCCTGTGGGT GACCGAGTTC
CCGCTCCTTG AATATGACGA GGAGGAAAAA CGCTATGTGG CAAAACACCA TCCTTTTACG
TCTCCGATGG ATGAGGATGT TGAATTGCTG GATACCGACC CGCTGAAAGT TAGGGCAAAA
GCTTATGACA TCGTGCTAAA CGGTACGGAA ATCGGAGGAG GAAGCATCAG AATTCACAGT
CAGGAGCTTC AGTCGAAAAT GTTCAAACTT CTTGGCTTTA GTGAGAAAGA TGCCTGGGAC
AGGTTCGGAT TCCTTCTTGA GGCTTTCAAA TACGGAACGC CTCCCCACGG CGGAATGGCA
TTCGGACTCG ACAGATTGGT AATGCTTATG GCCGGAAGAA ACAGCATCAG GGATGTTATT
GCATTCCCCA AAGTACAGAA TTCATCATGT CTTATGACAA ATGCGCCGGA TGAGGTTGAG
CCAAAACAGC TTGAGGAGCT TAAAATAAGG GTGGATTTGC AAAATTGA
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| Protein sequence | MGESIYGLKR THMCAELTVN DVGKTVTVMG WCHKSRNLGG LIFVTLRDRT GIIQVVFDNT
VNSELFAKAE GIRGEYVLAV VGEVVKRSPE AINPKLPTGE IEIIAKELRI LSTAESPPIY
IEEDSDVNEA TRLKYRYLDL RRPDMQRNLM LRHRVAKIAR DYFDEHGFIE IETPMLTKST
PEGARDYLVP SRVHPGKFFA LPQSPQLFKQ LLMVAGFDRY MQIVKCFRDE DLRADRQPEF
TQIDLEMSFV NVEDVLTINE GFIKRVFKEA INVDLEIPFI RMPYKEAMER FGTDKPDIRF
GFELVNLSDL VENCGFKVFS DAVKNGGSVR AINAKGCGNK FSRKEIDALG EFVKTYGAKG
MAWIVVGENE HKSPITKFFT EDEIKAVLTR MRAEPGDLIC FIADKNEVVF DSLGQLRVEI
ARKLGLLDNK EFKFLWVTEF PLLEYDEEEK RYVAKHHPFT SPMDEDVELL DTDPLKVRAK
AYDIVLNGTE IGGGSIRIHS QELQSKMFKL LGFSEKDAWD RFGFLLEAFK YGTPPHGGMA
FGLDRLVMLM AGRNSIRDVI AFPKVQNSSC LMTNAPDEVE PKQLEELKIR VDLQN
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