| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1288 |
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| Symbol | |
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| ID | 4809540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1566147 |
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| End bp | 1566833 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640106711 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001037713 |
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| Protein GI | 125973803 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000128008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAACA AAACCAAGGT GCTTGTAATT GATGATGATG TAAATATTTG TGAGCTCATA
AGGCTGTATA TGGAAAAGGA AGGTTTTGAG GTCGTAACGG TATACAATGG CAGCAAGGCT
CTGGAAGTAT TCAGAAACGA GGCTCCAAAC ATTGTTATCC TAGATATTAT GCTCCCGGGG
GCGGATGGAT GGCAGGTTTG CAGGGAGATA AGAAAAATCA GCAATATTCC GGTGATTATG
CTTTCGGCCA AAGGGGAGAC TTTTGACAAA GTGCTGGGTT TGGAGCTTGG TGCGGATGAT
TACCTTGTAA AACCTTTCGA ACCGAAGGAA CTCGTGGCAA GAGTGAAAGC GGTGCTCAGA
AGATATGAGC ACAAGGACAG TGATGTCCAA GAGATAGTAT ACCCGAATCT TATTATAAAC
AAGACCAATT ATACCTTGAA AGTAAACGGC AAAGAGATGG AGTTTCCGCC AAAAGAGCTG
GAACTTCTGT ATTTTCTTGC CTCAAACCCC AATAAGGTTT TTACGCGGGA ACAACTTATA
GAGCAGGTCT GGGGCTATGA CTTTTACGGA GATTCCAGGA CCGTGGACGT TCACATAAAG
AGACTTAGGG AAAAGCTTGA CAGTGAAGGA CAAAACTGGC AGCTTAAAAC TGTTTGGGGT
GTCGGATACA AATTTGAGGT GAAATAA
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| Protein sequence | MSNKTKVLVI DDDVNICELI RLYMEKEGFE VVTVYNGSKA LEVFRNEAPN IVILDIMLPG
ADGWQVCREI RKISNIPVIM LSAKGETFDK VLGLELGADD YLVKPFEPKE LVARVKAVLR
RYEHKDSDVQ EIVYPNLIIN KTNYTLKVNG KEMEFPPKEL ELLYFLASNP NKVFTREQLI
EQVWGYDFYG DSRTVDVHIK RLREKLDSEG QNWQLKTVWG VGYKFEVK
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