| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1252 |
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| Symbol | |
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| ID | 4809757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1517379 |
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| End bp | 1518464 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106675 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001037677 |
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| Protein GI | 125973767 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000147214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATAT ATGGGGATAC GGCTAAACGG AGTATCTCAA GGCAGTTTGA CAAATATTTT
GCGGGAGTTA TAAAAATGGT CGATGTTCAA AGCCTTACGG AGCAAATACG AATTTTAGTC
AATCAAATTT CTGTTTTAGT GATAATGGGA CTCATAGGGT TTATTGCAGG TAAAACCCGT
TATCTTCCGG ATAATTCGGG ATCAGTGCTT TCAAGAACGG TAATAAAGCT TACGGCACCG
CTCCTGATTT TTACGACCCT GGCGGGACGA AATTTTACTA AAGACATTCT GATAAACGGA
ATGTGGATAT TCCTTTTGGC GGTAGTATTT ATAATGTTTT CCTTTGTAGT GGGGCATTTT
GCCGGAAAGA TATTAAAACT TGAAGGGGCA ACTGCGAACG TATTTAAAAT GCATTTCATG
TTTGGAAACG TAATTTATCT GGCTTTTCCC CTTTTAAGGT CACTTTATGG AGACGGTATT
TTAATCTATG CTGTGTTTTA CAATTTGGCG AATGACGCTG TTTTATGGAC TTTGGGAATT
TTTCTCGTAA ACAGGCACAA CAAGGTGAGT GTGAAAGATA ATTTAAAGCA TCTTGTAAAT
GCCAATACCA TAGCTTTTGC AACAGGTCTT GTTATTATGC TGATAAAGTC AAATTTCAAA
GGATTTATAG ACGGCATTCC ATACATTTAT GATATAGGCG GATTCATAGC CAATGCATTT
ACTCCTATAG GAGAGGCTAC GGTTCCTTTG TCAATGCTTT TTATAGGCCT GATATTGTCT
GAAACGAAAA TAAGCAGTAC GAAGGATTTA TTAAAAAGAT ACCCTATATT TGTTTTAGCT
TTGTTTAAAC TTATCCTGAT TCCGTGTATT GCTTTGTTCG TATTTTCTTT TGTGGATTTT
GTAGAACCTC TTGTGAAAGC GGTAATCATA CTGCAGCTTT CGATGCCGTG TGCCACAATT
GTTCCCGCTT TGGCGGAGCA GTACGGTTCT GATTACAGGC TCGCCACCGA AAACGTGTTT
ATAACGACAA TACTGGGGAT TGTGACAATG CCCTTTGTGG TTTATTTGCT GACTTTGGCC
GGATAA
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| Protein sequence | MSIYGDTAKR SISRQFDKYF AGVIKMVDVQ SLTEQIRILV NQISVLVIMG LIGFIAGKTR
YLPDNSGSVL SRTVIKLTAP LLIFTTLAGR NFTKDILING MWIFLLAVVF IMFSFVVGHF
AGKILKLEGA TANVFKMHFM FGNVIYLAFP LLRSLYGDGI LIYAVFYNLA NDAVLWTLGI
FLVNRHNKVS VKDNLKHLVN ANTIAFATGL VIMLIKSNFK GFIDGIPYIY DIGGFIANAF
TPIGEATVPL SMLFIGLILS ETKISSTKDL LKRYPIFVLA LFKLILIPCI ALFVFSFVDF
VEPLVKAVII LQLSMPCATI VPALAEQYGS DYRLATENVF ITTILGIVTM PFVVYLLTLA
G
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