Gene Cthe_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1251 
Symbol 
ID4809756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1515687 
End bp1517084 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content43% 
IMG OID640106674 
Productxanthine/uracil/vitamin C permease 
Protein accessionYP_001037676 
Protein GI125973766 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000260393 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT TCTTTAAGCT CAAGGAAAAC GGCACAAATG TCAGGACGGA ATTTATAGCA 
GGTTTAACTA CTTTCGTAAC GATGGCATAT GTTATTTTTG TCAATCCCAA TACCCTGGAA
GCTTCGGGAA TGGACAAAGG TGCTGTGTTT GTTGCAACAA TACTTGCAGC AATAATCGGT
ACATTGATAA TGGGATTGGT GGCAAACGTT CCGTATGCCC AAGCTCCGGG AATGGGGCTT
AACGCATTCT TTGCATACAC CGTTGTTTTG GGACAGGGAT TTACCTGGCA GCAGGCTTTG
GCACTGGTTT TTCTTTGCGG ACTGATAAAC ATACTTATTA CCGTCACAAG AATTAGAAAG
ATGCTGATAG CGGCAATACC TCAATCCCTC CAGTATGCTA TAAGCGGAGG AATAGGCCTG
TTTATAACAT ACATAGGAAT TAAACAGGCG CATTTATTGG ATTTTACAGT CAGCAGCGGC
ACTTATACTA CACTTCCCAA TGGAAACGTG GTTTCAGGAG ACATTGTTCC GGCTCTTGCC
GACTTTACCG ATCCGGTAAC TCAATTGGCA TTAATCGGGC TTGTAATTAC GGTTGTTTTA
ATGCTTTTAA AAGTCAGGGG AGCAATACTT TGGGGGATTA TGGCAACCAC AGTGATTGGA
CTGTTTATGG GCATAACACC TATTCCGGAA CTGACAGCGT CAAACTTTTT GCCCCCGTCA
ATATCACCGA CTTTCTTAAA GCTTGATTTG GCGGGACTTT TCACTGATCC GGCGAAGATA
CCGACAGTCT TGGCCACGAT ACTTGCCTTC AGCCTATCGG ATACTTTTGA TACAATAGGA
ACATTCCTGG GAACTGGCAG AAAGACCGGA ATTTTTGACG AAGAAGACGA AAAAGCACTT
CACTCAGGCA AAGGATTTAA ATCAAGACTG GATAAGGCTT TGTTTGCAGA CTCAACTGCA
ACGTCAATAG GAGCACTTTT AGGTACAAGC AATACTACCA CTTATGTTGA AAGTGCTGCA
GGAATCAGCG TGGGAGGAAG AACCGGTCTT ACATCGGTTT TCACCGCATT GTTTTTCTTC
CTGGCATTGT TCCTGTCACC GATTGCCGGT ATGGTAACAT CCGCCGCAAC TGCTCCGGCA
CTTATTGTAG TGGGTATTTT GATGATGGAG TCCCTTGCCA AGATAAAATG GGATGAGTTT
GAAGAAGCGG TTTCAGCATT TTTCACGGTT GTTGTAATGC CTTTTACATA CAGCATTTCA
AACGGAGTTG CGGCAGGTTT TGTATTCTAT GTAATAACAA AAATTGTAAA AGGCAAAGCA
AAAGAGGTAC ATCCAATCCT TTATGTAGTA GTGTTGCTTT TTATACTGAA TTTCGTATTT
TCCGCTTTAA AGCTATGA
 
Protein sequence
MEKFFKLKEN GTNVRTEFIA GLTTFVTMAY VIFVNPNTLE ASGMDKGAVF VATILAAIIG 
TLIMGLVANV PYAQAPGMGL NAFFAYTVVL GQGFTWQQAL ALVFLCGLIN ILITVTRIRK
MLIAAIPQSL QYAISGGIGL FITYIGIKQA HLLDFTVSSG TYTTLPNGNV VSGDIVPALA
DFTDPVTQLA LIGLVITVVL MLLKVRGAIL WGIMATTVIG LFMGITPIPE LTASNFLPPS
ISPTFLKLDL AGLFTDPAKI PTVLATILAF SLSDTFDTIG TFLGTGRKTG IFDEEDEKAL
HSGKGFKSRL DKALFADSTA TSIGALLGTS NTTTYVESAA GISVGGRTGL TSVFTALFFF
LALFLSPIAG MVTSAATAPA LIVVGILMME SLAKIKWDEF EEAVSAFFTV VVMPFTYSIS
NGVAAGFVFY VITKIVKGKA KEVHPILYVV VLLFILNFVF SALKL