Gene Cthe_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1247 
Symbol 
ID4809752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1511773 
End bp1512402 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID640106670 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001037672 
Protein GI125973762 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000481744 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAGAA TTGGTGTGTT GGTTTCCGGA GGGGGAACAA ATCTTCAGGC TATAATTGAT 
AGAATTGAAA GCGGCTATAT AAAGGACTGC TCGATTGTTA CCGTTGTGTC GAGCAAACCC
AATGTGTATG CCCTTGAAAG AGCCAAAAAA CACAATATTC CGGCGGTTTG CATTGCCAGA
AAAGATTATC CTTCGGTGCA TGAATACGGG GAAGCGCTGA TACAGCATTT TGAACGCTGC
GAAGTGGGCC TTATTGTTAT GGCGGGATTT TTGTCCATAC TGGGAGAAAA CTTTGTAAAA
CGGTTTGAAA ACAGGATAAT CAACATTCAT CCTTCTTTGA TACCTGCTTT CTGCGGCAAA
GGCTATTATG GCATAATTCC TCATCAGAAG GCGCTGGAAT ACGGGGTCAA AGTGACCGGA
GCAACGGTCC ATTTTGTTGA CGTTGAAGCC GACAGCGGAC CTATTATTCT GCAGAAAGCT
GTGTACATAA GGGACGATGA CACTCCCGAA ACTCTCCAGA AGAGGGTGAT GGAGGAGGCG
GAGTGGGAAA TTCTCCCTGA GGCCATAAAG CTTTTTGCCG AAGGAAGGCT TGAAATCGAT
GGAAGGAAAG TTAGAATTAA GGATAATTAA
 
Protein sequence
MLRIGVLVSG GGTNLQAIID RIESGYIKDC SIVTVVSSKP NVYALERAKK HNIPAVCIAR 
KDYPSVHEYG EALIQHFERC EVGLIVMAGF LSILGENFVK RFENRIINIH PSLIPAFCGK
GYYGIIPHQK ALEYGVKVTG ATVHFVDVEA DSGPIILQKA VYIRDDDTPE TLQKRVMEEA
EWEILPEAIK LFAEGRLEID GRKVRIKDN