Gene Cthe_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1236 
Symbol 
ID4809928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1499016 
End bp1499723 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content37% 
IMG OID640106659 
Productfibronectin, type III 
Protein accessionYP_001037661 
Protein GI125973751 
COG category[R] General function prediction only 
COG ID[COG3979] Uncharacterized protein contain chitin-binding domain type 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTG ATGTGCCTTC TTTTTTTCCA TATCGGATTC AACAAGTCTA TGCTGAGAAG 
GAACAAATTG ATTCCGGTGA ATCGGTTGCA GAATCAGTAT ACAAAAAAAT TGAAACTTAT
GATGATATAC CGGTGGACAT TGAACCACCG AAGCCACCTG CCAATCTTCA GTTGATATCC
AAAACAAGTT CAACGGTATC GATGTCATGG TCTCCGGCTG AAGATAATAC AGGCGTAAGC
TATTATAATA TATATAATGG TTCTTCAGTT GTACAAGCTG TGTATGGAGA AAACACATCA
TGTACCGTTT CCGGTCTTTT ACCTTTTACG CAATATAGTT TTACGGTAAG AGCAGTGGAT
GAATCCGGAA ATGTTTCAGC GCCCAGCAAT ACACTTGTAG TTACAACTCT TAGGGAATCA
ATTCGTGTTA ATTCAAATAT GGCTTTATTT GAAGATAAAA TATATCAGGA TTTATATCTC
GAAAGCGGAA GTCTTAATCT TAACGGCTAT AATTTGACGA TAGAGGGAAA CCTTATACAT
TCCGGCGGCA CTTTAAATAT AAATGGTGGG AAGCTCATCG TAAAAGGAGA TTATAGAATT
CAAAAGGAAA GTGTAAATGC GCAAGGTCAA GTAACATATA GTGGTAGCGA CGGATATCTT
TACATGAGAA GGAGAATGAT TATGTTTGCG TGGAAGGGAA TTTTGTAA
 
Protein sequence
MTFDVPSFFP YRIQQVYAEK EQIDSGESVA ESVYKKIETY DDIPVDIEPP KPPANLQLIS 
KTSSTVSMSW SPAEDNTGVS YYNIYNGSSV VQAVYGENTS CTVSGLLPFT QYSFTVRAVD
ESGNVSAPSN TLVVTTLRES IRVNSNMALF EDKIYQDLYL ESGSLNLNGY NLTIEGNLIH
SGGTLNINGG KLIVKGDYRI QKESVNAQGQ VTYSGSDGYL YMRRRMIMFA WKGIL