Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1223 |
Symbol | rplT |
ID | 4809915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1465387 |
End bp | 1465740 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106646 |
Product | 50S ribosomal protein L20 |
Protein accession | YP_001037648 |
Protein GI | 125973738 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0292] Ribosomal protein L20 |
TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000332435 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGAG TTAAAGGTGG GGTAAGAACC CGTGCAAGAC ATAAAAAAAT ATTGAAACTG GCAAAAGGTT ATTTTGGTGC TAAAAGCAAG AATTTTAGAA TTGCAAACCA GGCAGTGATG AAATCACTGG TTTATGCTTA TAGGGACAGA AGAGCAAGAA AAAGAGATTT CAGAAAGCTT TGGATTACAA GAATCAATGC GGCTGCAAGA ATGAATGGTT TAAGCTACAG CAAATTTATG AACGGGCTTA AAAAATCCGG TATAGCTTTA AACAGAAAGA TGCTGGCTGA AATGGCCGTA AATGATGCAG AAGCTTTTGC ACAGCTGGTG GAAAAAGTTA AAGCGGTAAT ATAA
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Protein sequence | MSRVKGGVRT RARHKKILKL AKGYFGAKSK NFRIANQAVM KSLVYAYRDR RARKRDFRKL WITRINAAAR MNGLSYSKFM NGLKKSGIAL NRKMLAEMAV NDAEAFAQLV EKVKAVI
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