| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1174 |
|---|
| Symbol | |
|---|
| ID | 4810126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1401682 |
|---|
| End bp | 1402506 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640106596 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001037599 |
|---|
| Protein GI | 125973689 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1723] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATAAAA TGGTTTTTAA GGCCTATGCA GTAACGAACG AAATTGACCT TAACAGAATT
GCCGCCAAAT GTAATATTCC TAAAAAGTAT ACGTGGGAGG AACCACTTAT CCTTAATGAA
AATGTTTTAT CCTCAATTTT TAACAAAGAA ATTCCAGAAG GCCAAAAAAT TCTTGTATTT
TCTTTTGGAA GCATAGTATT TATAAACTGT CCTTCCGAGC ATGAAAAACT TTTTATTGAA
TATCTCAAAA ATGAAAAAAT CGATATAGAC GTTGAAAACT ACAAAGAATA TTCCGACGAT
TATGAACTTC AAGTGAGGGA AAATGCCGAA ATAGAACTGA CTGACAGTTA TCTGACGGTA
CCGAAGTTTG AATTTTTCTA TCCTGAGCTT GTTTCAACCG TTATTGCCAA GTCGGTGGCC
CTGGAAAAAA CCGAAGAGCA CCTCAGCACA ATCCTGGACA CTCTGGAAAC CATGATTGAT
AAACTGGAAA AAGGAAAACT CAATGTCGGA AACAAAGAAA TTGCAAAAAC CACGTCAAAA
ATAGTACGGC ATGAGTACAA CACAATAGCT TACATAATGA TATTAGACAA ACCTGACATT
ACCTGGACCA ACAGCGATGC AAAAAATCTT TATGACATGA TGTCAGAATT TTTCGAACTT
AATGACAGAT ATATAACATT AAAGGAAAAA ACCGATATTT TAAATAATGT ACTCAGCGGT
TTTTCTTCGA TAAGCCATTC AATGAGAGGA CTTTTTGTTG AATGGGTTAT AGTTATTCTA
ATATTTGTGG AAATAATTCT TATGCTCGCA GATTTATTAA AGTAA
|
|---|
| Protein sequence | MDKMVFKAYA VTNEIDLNRI AAKCNIPKKY TWEEPLILNE NVLSSIFNKE IPEGQKILVF
SFGSIVFINC PSEHEKLFIE YLKNEKIDID VENYKEYSDD YELQVRENAE IELTDSYLTV
PKFEFFYPEL VSTVIAKSVA LEKTEEHLST ILDTLETMID KLEKGKLNVG NKEIAKTTSK
IVRHEYNTIA YIMILDKPDI TWTNSDAKNL YDMMSEFFEL NDRYITLKEK TDILNNVLSG
FSSISHSMRG LFVEWVIVIL IFVEIILMLA DLLK
|
|---|
| |