Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1171 |
Symbol | |
ID | 4810123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1397667 |
End bp | 1398914 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640106593 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_001037596 |
Protein GI | 125973686 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.987269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAGAA GAGTCTTGAT ACAAATTCAG TGCTTTACAG TAGCAATGAT GATTTTGTTT TTCTCTCAAA GTCCGGTTTT CGCAGTTGCG GAACCTCCGG AAATCAAGGC ACCTTCCGCT ATTTTGATGG AAGTGCAGAG GGGACAGATA CTCTATCAAA AGAATCCAAA ATTAAAACTT CATGTTTCGT GTGCAAATAA AATTATGACC GGACTCATTG CTTTGGAAAA AATGCAGAAT CAACTGAACA CCAATATCAC TGTCAGCAAG AAGGCGGTTT CTGTTGAAGG AGCTGTGTTA AATCTCGAGG TCGGCGGAAA ATACCCGGTT GAAGATTTGA TATATTCGGT TTTGTTAGGA TCCGCCAATG ACAGTGCCAA TGTTCTGGCT GAGTATATAG GTGGAGACGA GAAGGGTTTT GTTGAGCTTA TGAATAAAAA GGCCCAGGAA CTTGAGATGA AGGATACTTA TTTTACAAAT CCCACGGGTC TTTATGATGA AAAACAATAT ACAACGGCGT ATGACCTGGC CGTTTTAATA AGATATGCTC TGACAAAATC CAGCACTTTC AATGAGATGT TTTCGGCTAA GGCCAGACCA TGGGTTGACG GAACGCAGAT TTTAATAAAC AGCAATGAGT TGTTCTGGAG CTATGACGGC GTTGACGGTG GAAAGACCGG ATATAACGAA ATAGACCGTC AAACGGCAAT TACCACTGCC ACAAGAAACG GGCAAAGGTT GATATGCATA GTTCTTGATT CACCGGAAGA AAGCATGTAT GACGATTCGG TAAAGCTTCT GGACTATGGT TTTTTAAATT TCAGGACAGG CATTCTGGTA TCAATGGGAC AACCTTTGAA GAAAGTTACC GTCGGCGATA AAGTTATAGA TTTGGTTAGC ATAGGTGACT ATTACTATAC TTACCCTGCC GGGGAAAATT ATATAAAGAA TATTGAATTT AAAGTTCCTG AAAAGTTTGA TCCTCCTGTA CTGAAAAGTG ATGTTTTAGG CATTGCAAAG TATACTTTGG AGGATGGAAC GGTTATTGAA GTAAGTCTGC ATCCGGCGGT TGATGTTTAC TCTTCGATGG GCTTGTTTGA GTCGTTGATA AATCAAGTGA AGGAATACAG GGATATAGTA ATATTGCTGT GTATTCTTTT GGTAATAGAA TTATTTATTG CGGTTTATCA TATAGTGAGG CTGATAAAGC GGCTGTTTCT AAAGCTTGTT TACAAGCCTG GGAAATAA
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Protein sequence | MYRRVLIQIQ CFTVAMMILF FSQSPVFAVA EPPEIKAPSA ILMEVQRGQI LYQKNPKLKL HVSCANKIMT GLIALEKMQN QLNTNITVSK KAVSVEGAVL NLEVGGKYPV EDLIYSVLLG SANDSANVLA EYIGGDEKGF VELMNKKAQE LEMKDTYFTN PTGLYDEKQY TTAYDLAVLI RYALTKSSTF NEMFSAKARP WVDGTQILIN SNELFWSYDG VDGGKTGYNE IDRQTAITTA TRNGQRLICI VLDSPEESMY DDSVKLLDYG FLNFRTGILV SMGQPLKKVT VGDKVIDLVS IGDYYYTYPA GENYIKNIEF KVPEKFDPPV LKSDVLGIAK YTLEDGTVIE VSLHPAVDVY SSMGLFESLI NQVKEYRDIV ILLCILLVIE LFIAVYHIVR LIKRLFLKLV YKPGK
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