Gene Cthe_1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1159 
Symbol 
ID4810827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1376513 
End bp1377424 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content34% 
IMG OID640106581 
Producthypothetical protein 
Protein accessionYP_001037584 
Protein GI125973674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.303478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATA AAATTATCTT AGGATTAGAC AATGGAAATG CTTATACCAA AAGCAGTGAG 
GGTTTTAGTT GTCAGTCGGG CTTTACAAAA TCTGATGTAG AGCCTATTAC AAAACAAAAT
CTGCTTATTT ATCAAGGTAT TTATTACAGC ATAGGAAACA ACAGGTCGAG CGTTCAATTA
GATAAGACTC AGACTCAGGA TGCTTTTATA ATATCTTTGG CTGCAATAGC AGATGCAATT
AACAAGGCAG GAATAGAACA GAAAGCAGAT GTATTTTTAG GTGTGGGGCT TCCTATCATT
CACTACGGTA AAATGAAACA TAAATTCAGG GAATACTTTA TAAGGGACAA TATCAAGTTT
AGTTTTAATG GAAGCGATTA TGCGGTTAAT ATTGTTGATT GCAGGGTATA CCCCCAAGGT
TACGCAGCCT TTATTAATAT CTACAAAGAC TATAAAAATG TATCAGTAGC AAACGTAATT
GATATCGGTG GCTATACTAC AGATTTTTTC ATAGTAGAAA ACGGGATAAT TAACACTGCA
ACCTGCTATT CACTACCGAA CGGCACAATC ACATTGTTTG CATCCATACA GCAGGAATTA
TTAAAAATAA ACATTAATCT GACAGAAAAG CAGATACAGG ATATTATTTT AGGTAAGCAG
CCAGTTTTAT TTGATGCAGA TATAAATAAA ATGATAGAAA TAAAAGCAAA GGAATATGTA
GAAAATTTGC TGACAAAGAT TTTAGAATAC GGTTTTGAAT TCAGGAACCC AACAATAATC
GTTGGTGGTG GGGGTATGAT GCTGAGGAAA TATATAGAGT CTTCGGATAG AGTAAAATAT
ATAGAAAACC TTGACCAGTT TGCTAATGCA CGTGGATATA AGATTTTGCT GGAACAAGAA
CTAAGAAGGT GA
 
Protein sequence
MENKIILGLD NGNAYTKSSE GFSCQSGFTK SDVEPITKQN LLIYQGIYYS IGNNRSSVQL 
DKTQTQDAFI ISLAAIADAI NKAGIEQKAD VFLGVGLPII HYGKMKHKFR EYFIRDNIKF
SFNGSDYAVN IVDCRVYPQG YAAFINIYKD YKNVSVANVI DIGGYTTDFF IVENGIINTA
TCYSLPNGTI TLFASIQQEL LKININLTEK QIQDIILGKQ PVLFDADINK MIEIKAKEYV
ENLLTKILEY GFEFRNPTII VGGGGMMLRK YIESSDRVKY IENLDQFANA RGYKILLEQE
LRR