Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1156 |
Symbol | |
ID | 4810824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 1373054 |
End bp | 1375117 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640106578 |
Product | zinc finger, CHC2-type |
Protein accession | YP_001037581 |
Protein GI | 125973671 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000142218 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAA GTATAGATAG CATCATAGCC AAAAAAGTTT CTCACGATGT TGGTATTTTA ATATTTCAAT ACCTTAATGA TATCGAACCC TTAATCCAGC AATCTCTTAC TGCCGCAAAA TTGAAAGACT TTTACGGGCT TAAAGGGAAA TATAGCAAAG GACGGTTTGT TTGTCCGTTC CATCACGGTG CAGATAACCC AACTTCCCTT TCTATGAATG ATAACAAGCG ATGTTTTCAC TGCAACGCCT GTGGAAAAAG CGGCACATAC CTTGAATTTA TTATGTATAT GCAAAATATT TCTGGAAGGA ACAGTTATAA TGATGCAAAA ATTTTTGCTG CAAACCATTT TACTAAACTG AACTTAGGAT TCAATTCAAT CGCAGATTTT GAACAGAAAT TGAAAGATAA AATATTAGAA CGTTATCGTA AAACTAATAG TCTTAGATAT ACGGACTACT ATGATATTTG GCTTCTACCC GAAAGATATT TTTCTTCTAA AGAACAGTCA CAAGTCCGCC AATACCAAGA AGAACAACAA ACAAAGCCTT CTTTAGAAGT TTCTCTTTCA AACTCTACAA ACAAGCCCGG TTTTATACTG GAATCACTGG ACCTTGAAAT GACTATCAGG CATCTTAAAG CCCAAAATAT CATTGTTAAT GGAATTACTG ATTATGACGA GGCGGTTCAG GTGGCTAAGA ACAGTAAACT GATTAAGGAT TTTACCAAAA ATGCAGATAA ATTAAATTCT GTCGATAAAC TCACTGATTA TATGAGTAAG AAATATAATA TAGACATAGA TACTGCTTTG AAATATGGTT TAATATTTTT TGATAAAAGC AGCCAACATC AACTCTACTA TAGCGATTTC TTCATGTTGA ATAACAGAGT CTTGTTCCCT GTAAGAGACC ATGAAACCGG CATTATTGTC GGGTATCAGT GCCGGCGGAC TGACTTAAGT GCTCCAAGAC ATTATAAATA TCTAAACATA ACCGACTACC AGGACAACTT GATAACAAAT GAAAACGGAA CAACATATAG AGATTTTGTT CCTTTTAAGG TTGGAAACTT CCTTTTTAAC CTTTATGAAC TTAAGGGTAA GTGCATTAAT ACCTTATGGA TTACAGAAGG GATTGCAGAT GCGATTAAAC TTTCCAGTAT GGGATATGAT GCTGTTTCTC TTGGGCAGGC AAACTTGACC GACTATCAAA TATATTTAAT TGACAAGTAT TTTGGCAAAG ATGTGACTCT TAACCTATTC TTCGACAATG ATGACAATAA AATTGGGCAA AACAAAAGTA TCGCAGCAGC CTACCGCCTT TGGCAGTTTG GTTTCAGGAA TATTAGAATT ATAAATACCT TTAAGGAAAT GGGAAAAGAT ATAACTGATT GCTCTGTTAA ACTGCATGAT GATGATATGC TAAGACTTTT TATTAATCAC TGGGAAAAGC AGGCATATTC ATTTGCCCCT GCTAGCAATG AAGATTTAAG TGCTTTATTA AAGACAGGTC TTTATAGTGA AAGTGAAATC CTGTTTATTG ACCCAAGAGA TGTTGAGCGG ATAATTAGTT TTGGTGAAAT GCTTAATAAA TATTTAGATT TTAAGAATAT GACTTATCAG CAACTTAAAT TATTAAAGAA ATTATGCTCC TTTAAGGAAG ACGAAATTAA AATTCTATTA AGCCTTTCTA CAAAGGATTT CCTTGACGTA CAGAATACTA ATGAAACAGA GGCTGCCATA AAAGAAAACA GCAATACTAA TATAGACAGT ACCCAAGAAG AAGGAAATGT TGAAGGAAGC CTAATCAACA TTTCTAAAGC GCAACTGTTT CACCTTAAAA AGAGATTTGA TATAGGCATA ATTAAAAAAA TAGATAACGA ATGTTCCAAA AAACAGATTG CCGCTATCGT CGGTAATATA ATAAAAAATA AAGATTTTGA TGTATGGGAT TACATCCATA AAAAAGGAAG TCAGCATTCT TCAACTAGTA TAGCCCCTAG CACCACTATA CTGGATGATG GCAACTTCAC TCCTGTATAT GACGATGTCA GTATTCCTTT TTAA
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Protein sequence | MNRSIDSIIA KKVSHDVGIL IFQYLNDIEP LIQQSLTAAK LKDFYGLKGK YSKGRFVCPF HHGADNPTSL SMNDNKRCFH CNACGKSGTY LEFIMYMQNI SGRNSYNDAK IFAANHFTKL NLGFNSIADF EQKLKDKILE RYRKTNSLRY TDYYDIWLLP ERYFSSKEQS QVRQYQEEQQ TKPSLEVSLS NSTNKPGFIL ESLDLEMTIR HLKAQNIIVN GITDYDEAVQ VAKNSKLIKD FTKNADKLNS VDKLTDYMSK KYNIDIDTAL KYGLIFFDKS SQHQLYYSDF FMLNNRVLFP VRDHETGIIV GYQCRRTDLS APRHYKYLNI TDYQDNLITN ENGTTYRDFV PFKVGNFLFN LYELKGKCIN TLWITEGIAD AIKLSSMGYD AVSLGQANLT DYQIYLIDKY FGKDVTLNLF FDNDDNKIGQ NKSIAAAYRL WQFGFRNIRI INTFKEMGKD ITDCSVKLHD DDMLRLFINH WEKQAYSFAP ASNEDLSALL KTGLYSESEI LFIDPRDVER IISFGEMLNK YLDFKNMTYQ QLKLLKKLCS FKEDEIKILL SLSTKDFLDV QNTNETEAAI KENSNTNIDS TQEEGNVEGS LINISKAQLF HLKKRFDIGI IKKIDNECSK KQIAAIVGNI IKNKDFDVWD YIHKKGSQHS STSIAPSTTI LDDGNFTPVY DDVSIPF
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