| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1127 |
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| Symbol | |
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| ID | 4811425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1342013 |
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| End bp | 1342918 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640106549 |
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| Product | phage integrase |
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| Protein accession | YP_001037552 |
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| Protein GI | 125973642 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGATA ATAAGGAGTT AACTGAAAGC AAATTGCATC TTGATGAATT TTCTGCTTAT
CTAATGAGCA TCGACAAGTC TGACTCTACA ATTAAGACAT ATATTGAACA CATACAGGCA
TTTGCGAAAT GGTTTGAAGA AACCAATTGT ATAGACTTTG ACCCTGCTGT TATAACCGAA
ATAGATATAA GGGATATGCG TTCGTATTTG CAAGGAACAA GGCATTTAAA GGAAACAACT
ATTAATCTTA GGCTGGCCAG TTTAAAATGC TACTTCTCTT TTTTAGAATC AGAAAAATAT
ATTAAGCATA ATCCCGCACG AAATATTAGA AAAATAAAAT TGCAATCACC AAATATAGCA
AAATCTCTTG ATGAACAGAC ATATCGTGCA TTACGCCGTC ACGTATACCG TGGGGGAAAT
AAAGCCCATA TTGCTATGTT TGAGATTTTT ACCAGGTGCG GGGTTAGAAA TTTCGAACTT
ATAAACATCC GCTTAACCGA TTTTGATATA AGCGATAGGA AGGGAACATT AAAGATAGTT
GGCAAATTAA ATAAAGTACG CTATATACCT CTGCATAAGG ATGTTCGGGA TGCAATAAAC
AACTGGATGG AGATTAGAAA GAACATTAAA ACAGAGTATG ATAATCTGTT TATTTCTGAG
CGCAAGACCC CTTACACTAG GTCAGGAATC TGGAAGATTT TTAAAAAATA CTGTGAACAA
ATCGGGATTA CTGATGTAAC TATCCATTCC TTCAGACATT ATTTTTGCCG AACTTTACTC
AAAAATGGCG TTGATATTTC TGTAGTTGCC AAGTTAGCAG GTCACTCTTC AGGTTTTGTT
ACGGCTCAGG TATATACCAT TCCAAGACAA GAAGAATTGG AGGCAGCAAT AGAAACATTA
GTTTAA
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| Protein sequence | MRDNKELTES KLHLDEFSAY LMSIDKSDST IKTYIEHIQA FAKWFEETNC IDFDPAVITE
IDIRDMRSYL QGTRHLKETT INLRLASLKC YFSFLESEKY IKHNPARNIR KIKLQSPNIA
KSLDEQTYRA LRRHVYRGGN KAHIAMFEIF TRCGVRNFEL INIRLTDFDI SDRKGTLKIV
GKLNKVRYIP LHKDVRDAIN NWMEIRKNIK TEYDNLFISE RKTPYTRSGI WKIFKKYCEQ
IGITDVTIHS FRHYFCRTLL KNGVDISVVA KLAGHSSGFV TAQVYTIPRQ EELEAAIETL
V
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