Gene Cthe_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1076 
Symbol 
ID4811374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1283415 
End bp1284128 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content39% 
IMG OID640106498 
Producthypothetical protein 
Protein accessionYP_001037501 
Protein GI125973591 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ATGATAAAAG CTATATTTTG GCGCTTTTGT TTTTGGTTTT TGGAATACTT 
TTATCAGTCC AGTTTAGAAG CGTTTTGAAT TCCAAGAAGA ATAAACCTTC TATTGCTTAT
CAGATTGAGA ACCTCCAAAA TGAAATAAAA ACTGAAAAGC TCAAAGGAAG CAAACTTAGG
GAGGAAATCG ACCAGAACAT TAAAAAGCAG GATGAGTACA TTAAAATGTT CATGGAACGA
AAAAATGACG ATGAGTTTGC CAGAGAGTGG GAGAAAGCAA AACTTGTGGC AGGTCTTACT
GACGTGGTGG GAAACGGAGT GATTGTATAT TTGGCGGATG CTCCGCAGCA GTATGGAGGA
AAACTTGAGT ATTATGTTGT GCATGACGTG GAAATAATGG AAGTTTTAAA CGAACTTAAA
AAAGCAGGAG CGCAGGCCAT ATCGGTTAAC AATGAGAGGA TTATATCTAC AAGCGAAATA
ATTTGTTTGG GACCTACGGT GCGTATCAAC AGAAACCGGT ATCCGGTCCC GTACGAAATA
AAGGCAATAG GTGATCCCAA AAAGCTCTAT GAAGCGCTTG TAAACAGTCC TATTGCCGGT
GAGTTTCAAA TGTTTAACAA AAAATTTGAA GTTCGGATGG CGAAGGATAT AGTAATACCA
AAATATGGCG GAGATATTGA TGATTTAGTC AGCGGCTTGG AGGTGGTCGA GTAA
 
Protein sequence
MKKNDKSYIL ALLFLVFGIL LSVQFRSVLN SKKNKPSIAY QIENLQNEIK TEKLKGSKLR 
EEIDQNIKKQ DEYIKMFMER KNDDEFAREW EKAKLVAGLT DVVGNGVIVY LADAPQQYGG
KLEYYVVHDV EIMEVLNELK KAGAQAISVN NERIISTSEI ICLGPTVRIN RNRYPVPYEI
KAIGDPKKLY EALVNSPIAG EFQMFNKKFE VRMAKDIVIP KYGGDIDDLV SGLEVVE