| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1062 |
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| Symbol | |
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| ID | 4811360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1268083 |
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| End bp | 1269528 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106484 |
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| Product | VanW |
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| Protein accession | YP_001037487 |
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| Protein GI | 125973577 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACATAG AAGGTATGGA TATGTTGCTT GATTTTTTTT CGAAAAACAA AACTAAAATT
TTAATATTTG CGGCAAGCCT TTTGTTGCTT GTAATAGCTT CAGTTTCGAC TTATGTGGTA
GTTGTTCTGA ACAGAAAAAC TTTTTACGAC GGTATTGCTG TTGAAGGGAT TGATGTATCC
GGATTGACTG TTGATGAGGC AAGAGAAAAA GTGGAAAAAA AGCTTGACAG GATTGTATAT
GAAAATAGTC TTTTGCTAAA CTATGAAGGC ATGACATGGA GGATCGGGCT TTCAGATATA
TCTTACGATT TCCTTGTGGA TGATGCAATA AAAAGAGCCT ATTCAATAGG AAGAGAAGGC
AGTGTTTTAA AAAGGCTTAA AACCATAAGG AATTTAAAGT CTGATAAAAA GAACGTTTTA
GCGAAAGTTG TCTTTTCAAG GCCTCTTCTT GAGGAATATA TTACCAGCAT CAAAAAGCAA
GTTGACGAAA ATCCGAAAGA TGCAACGGTA ACTTACCAAA ATGGCAATAT TATGTTTGAA
AAAGAGATTA TCGGGCGATT TGTGGATGTT GACAAAAATC TTGGTTTGTT AGAAAATAAA
TTAATAAAGA GGGATTTCTC GCCTTTCGAA CTTGAAGTCA CAAATGTTTA TCCGAAAATT
ATGTACAAGG ATATTTCTCA TATTGAAGAG GTAATTTCCT CTTTTTCCAC TGTTTTTAAT
TCAGCCAATG TCAACAGAAG CCATAATATC AAACTTGCGT GTGAAAGAAT CAATAACACA
GTGTTGCTTC CCGGTGAGAC ATTTTCCATG GATGCTTCTT TGGGGTCAAG AACAAAAGAA
AATGGTTACA AAGACGCACC TGTCATAGTT AAAGGCCGCT TGATTGAAGG AGTTGGAGGT
GGTGTTTGCC AGGTTACGTC AACATTGTAT GTTGCAGTAC TCAAGGCAAA GCTTGAGGTG
GTTGAAAGGG TAAAACATTC AATGCCTTTG GGATATGTGG AGCCAGGTCA GGACGCAACA
ATATCGGAAG GCTACATCGA CTTCAAATTC AGAAACAATA CGGATCGTGC CTGCCTTATA
AGTGCATCGG TTGTCGGAAA CAGGATAGAT ATAAAGCTGC TGGGAGCAAA AAGAAATTCA
AATTATGATG TAAGGCTGAA ATCTGTTGTT GTGGAACGTA TTTCTCCTCC GGAAGATGAG
ATAATTGTCG ACAAGTCGCT GCCCAAAGGA GCAGTGAAAA TTGAAAGGGA GCCGGTGCAA
GGTTTGAAGG TGATAGTATA CAGGGAAACT TATGAAAATA ATAGACTTAT TGAAAGGGAA
AAAATATCCG AAGATATTTA TAAACCTGTA CAAGGTTTAA AAAGAGTGGG GCCTTATGAC
AGCAATGATA CGGAAGGCGG AGAAGAAACT GTAAAGGAAG AAGCTATGGA AGAACAAACT
ATATAA
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| Protein sequence | MDIEGMDMLL DFFSKNKTKI LIFAASLLLL VIASVSTYVV VVLNRKTFYD GIAVEGIDVS
GLTVDEAREK VEKKLDRIVY ENSLLLNYEG MTWRIGLSDI SYDFLVDDAI KRAYSIGREG
SVLKRLKTIR NLKSDKKNVL AKVVFSRPLL EEYITSIKKQ VDENPKDATV TYQNGNIMFE
KEIIGRFVDV DKNLGLLENK LIKRDFSPFE LEVTNVYPKI MYKDISHIEE VISSFSTVFN
SANVNRSHNI KLACERINNT VLLPGETFSM DASLGSRTKE NGYKDAPVIV KGRLIEGVGG
GVCQVTSTLY VAVLKAKLEV VERVKHSMPL GYVEPGQDAT ISEGYIDFKF RNNTDRACLI
SASVVGNRID IKLLGAKRNS NYDVRLKSVV VERISPPEDE IIVDKSLPKG AVKIEREPVQ
GLKVIVYRET YENNRLIERE KISEDIYKPV QGLKRVGPYD SNDTEGGEET VKEEAMEEQT
I
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