| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1035 |
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| Symbol | |
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| ID | 4811329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1237457 |
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| End bp | 1239448 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106453 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001037460 |
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| Protein GI | 125973550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACATAG AGAAAAGAAT ACTTGAGCTT AGAGAGATTT TAAACTACCA CAGCCATAAA
TATTATGTGG AGGATGCACC GGAAATAAGC GATTTTGAAT ATGATGAGCT TTACAGGGAG
CTTGAAAAAC TTGAGCAGGA AAGACCTGAC CTCATTACAC CGGATTCTCC CACCCAAAGA
ATTGGAGGAA AACCCCTGGA AGGATTTAAA AAGGTTGTGC ATGCTGTACA GATGCAAAGT
CTTTCCGATG TGTTCAGCAG GGAAGAGCTT TTGGCATTTG ACAGAAGAGT GAGGGAAGCC
GTGGGAGACG ATGTTGAGTA TGTTGTGGAG AAAAAAATTG ACGGCCTGTC GGTTTCGCTG
GTTTATGAAA ACGGTGTGTT TACAAGGGGG GCAACCCGCG GCGACGGTCT GGTTGGAGAA
GATGTGACAC AAAATCTTAA AACCATAAGA ACAATACCTT TGAGGCTGAA AAGGGATTTG
CCTTTGCTTG AGGTAAGAGG CGAAGTGTTT ATATCCAAAA AGGATTTTAT CAAAATAAAT
GAAGAGCAGG AAGCGGCAGG CCAGCAGCTT TTTGCAAATC CCAGAAATGC CGCCGCCGGC
TCTTTAAGGC AGCTGGACCC GAAAGTGACC AGTCAAAGGA AACTTGACAT ATTTGTTTTT
AATATACAAA GAATAGAGGG CCAAAGTTTT AAAACCCATT CTGAGACTCT TGAGTTTCTC
AAGGAACTTG GGTTTAAGAC AAGCCCGGGA TATAAGGTAT GCAAGGATAT AAATGCTGTT
TGGGAGGAAA TAAACCGCAT CGGAGAAGAA CGGGGAGAGA TTGATTTTGA AATCGACGGA
GCCGTAGTAA AGGTGAACTC CCTGGAACAA AGGGAAATTT TGGGTTCCAC AATCAAGGCT
CCGAGGTGGG CTGTAGCTTA TAAATATCCC GCTGAAGTTA AAGAAACTGT TGTTAAGAAA
ATAACGGTAA ATGTCGGAAG AACAGGGGTG TTGACGCCGA TTGCCATCTT TGACCCGGTC
AGACTTGCAG GTTCCACCGT GAGCAGGGCC ACACTTCACA ACATGGATTA TATAAAAGAA
AAGGATATTA GAATAGGTGA CACGGTGCGT ATAAGAAAGG CCGGTGACAT AATTCCCGAA
GTAGTGGATG TGGTTTTTGA AAAACGCAGT GGAAATGAGG CTGAATTCAA CATGCCCGAA
CAATGTCCTG TATGTGGTGC TGATGTAGTG AGGGAAGAGG GGGAGGCGGC ATACAGATGC
ACCGGCATTG AATGTTCCGC CCAGCTGTAC AGAAAAATAG TTCATTTTGC TTCAAGGGAT
GCAATGAATA TAGAAGGCCT TGGACCTGCG ATTATTGAGG TCCTCCTGGA AAAAGGGCTC
ATAAAAGAGA TAGCTGACCT GTATTATTTG CATAAGGAAA AAGAAACCCT TGTAAACATC
GAAAGAATGG GTAAGAAGTC CGTTGAAAAT CTTCTTGCTT CGATAGAAAA GTCAAAGCAA
AATAATATTG ACAGATTGAT CTTTGGCTTT GGAATCAGAC ACATAGGACT TCGGGCGGCA
CAGCTTTTAA GTGAAAATTT TGAGTCTCTT GACGCTCTTA TGAATGCTTC CGCGGAAGAT
ATTATGGCAA TACCGGAATT TGGCGAAAAA ATGGCAAAAA GTGTTGAACA ATTCTTCAGG
CAAAAGCAGA ACAGGGATAC TGTAGAAAAG CTTAAAGCAG CCGGAGTGAA TACTGTAAGT
TTTGGTAAAA AGAAAATCAA AGACAACAGA TTTGAAGGCA AAACCTTTGT GTTAACCGGT
ACACTTCCAA GCTTTACTCG AAAGGAAGCG GAAGAAATTA TAAAGAGTTT TGGAGGAAAG
ACTTCAGGAA GTGTGTCTAA AAAGACTGAT TATGTGCTTG CCGGGGAAGA TGCGGGAAGC
AAGCTTCAAA AAGCTAAAGA GCTGGGAATT GAAATAATTG ACGAGGATAA ATTTAGAAAA
ATGATAGAAT AA
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| Protein sequence | MDIEKRILEL REILNYHSHK YYVEDAPEIS DFEYDELYRE LEKLEQERPD LITPDSPTQR
IGGKPLEGFK KVVHAVQMQS LSDVFSREEL LAFDRRVREA VGDDVEYVVE KKIDGLSVSL
VYENGVFTRG ATRGDGLVGE DVTQNLKTIR TIPLRLKRDL PLLEVRGEVF ISKKDFIKIN
EEQEAAGQQL FANPRNAAAG SLRQLDPKVT SQRKLDIFVF NIQRIEGQSF KTHSETLEFL
KELGFKTSPG YKVCKDINAV WEEINRIGEE RGEIDFEIDG AVVKVNSLEQ REILGSTIKA
PRWAVAYKYP AEVKETVVKK ITVNVGRTGV LTPIAIFDPV RLAGSTVSRA TLHNMDYIKE
KDIRIGDTVR IRKAGDIIPE VVDVVFEKRS GNEAEFNMPE QCPVCGADVV REEGEAAYRC
TGIECSAQLY RKIVHFASRD AMNIEGLGPA IIEVLLEKGL IKEIADLYYL HKEKETLVNI
ERMGKKSVEN LLASIEKSKQ NNIDRLIFGF GIRHIGLRAA QLLSENFESL DALMNASAED
IMAIPEFGEK MAKSVEQFFR QKQNRDTVEK LKAAGVNTVS FGKKKIKDNR FEGKTFVLTG
TLPSFTRKEA EEIIKSFGGK TSGSVSKKTD YVLAGEDAGS KLQKAKELGI EIIDEDKFRK
MIE
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