Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1007 |
Symbol | |
ID | 4811301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 1203392 |
End bp | 1205236 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106425 |
Product | GTP-binding protein TypA |
Protein accession | YP_001037432 |
Protein GI | 125973522 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000478233 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAAACG CTGGTGAATA TATCAGAGAA AATATCAGAA ATGTCGCTAT AATTGCACAT GTTGATCACG GGAAAACAAC CCTTGTGGAC GCAATGCTGA AACAAAGCGG TATATTCAGA GAAAATGAAC AGGTCCAGGA AAGAGTAATG GACTCAAATG ATCTGGAGAG AGAAAGAGGT ATTACCATTC TGGCAAAAAA CACTGCCATA ACCTATAAAA ATATCAAAAT TAATATTGTG GACACACCGG GTCACGCTGA TTTCGGCGGC GAAGTCGAGC GGGTTCTCGG GATGGTCGAC GGTGTCCTTT TGTTGGTTGA CTCCTTTGAA GGCACAATGC CTCAGACAAG ATTCGTACTT AGAAAAGCTC TTCAGGCTAA TTTAAAACCC ATAGTCGTCA TAAATAAAAT TGACAGACCC GAAGCAAGAC CGGTTGAAGT CGTGGATGAG GTCCTTGAGT TGTTCATCGA ACTTGGAGCC GATGATGAAC AGCTCGATTT TCCTGTTGTA TACGCTTCCG CAAGAGAAGG TTATGCTCTA TACAACTTGA ATGACGATCC GAAAAACCTT GAGCCGCTGT TTGAAACCTT AATAAATCAC ATACCGGCTC CCAAAGGATT TATGGACAAA CCTCTTCAGC TTTTGGTATC AAACATAGAC TATGATGATT ATGTTGGAAG AATAGCTGTG GGAAGAATTG AAAGAGGCAT GATTAAAACA GGACAACAGG CCGCTTTGTG CAAAAAGGAC GGAAGCATTG AAAATGTCAA AATAAGCCGG CTCTATGTAT TCAGCGGTCT TAAAAGAATT GAAGCCGATT CTGCAATGAT GGGAGACATT GTTGCAGTCT CAGGCATCAG CAATATTAAC ATCGGTGAGA CAATTTGTAA TGTTGATGCA CCAGAACCCT TACCTTTTAT TGAGATAGAA GAACCGACAA TCACCATGAC CTTCAGCGTA AACAACAGTC CTTTTGCCGG TCGGGAAGGA ACTTTTGTAA CTTCAAGGCA TCTAAGGGAA AGACTCTTTA AAGAACTGGA AACCAATGTT AGCCTTAGAG TCGAAGAAAC TGATTCCCCT GACTCCTTTA AAGTATCCGG AAGGGGTGAA CTTCATCTTT CAATCCTGAT TGAAACCATG AGACGTGAAG GCTACGAGTT TCAGGTTTCC AAGCCCAATG TAATTTTGAA GGAAATCGAC GGTGTACTGT GTGAACCTGT GGAATATCTG ATTATTGACG TTCCTGAAGA GTTCATGGGC GTTGTCATGG AAAAACTGGG AAGCCGCAAG GCCGAAATGG TAAACATGCA TTCTTCCCAT CAGGGATATA TGAGACTGGA ATTTAAAATA CCCTCAAGAG GTCTTATCGG GTACAGGTCG GAATTTTTGA CTGACACAAA GGGAAATGGT ATAATGAATC ATATATTCCA CGGTTTTGAA CCTTTCAAGG GAGAAATACC GAAAAGGCAA AGAGGCTCAA TGGTTGCATG GGAAGACGGA GAAGCTGTAA CGTACGGCCT TTACAATGCC CAGGAAAGGG GTACGTTGTT CATCACGCCC GGCACAAAGG TATATGAAGG CATGATAGTC GGAGAAAATT CAAGGCCGGA GGATATTGTC ATAAATGTTT GCAAAAAGAA ACATGTTACC AACATGAGAG CAGCCGGTTC CGATGAAGCT TTGAGGCTTA CGCCTCCGGT GATACTCAGT CTTGAGCAGT GTCTGGAGTT TATAGAGGAT GACGAACTGG TGGAAGTCAC ACCAAAAAAC ATACGACTGA GAAAAAAGAT TCTCGACACG GAGCTTAGGG CAAAAACAAA GGCAAGAAAA AAAGAACAGC CTTGA
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Protein sequence | MENAGEYIRE NIRNVAIIAH VDHGKTTLVD AMLKQSGIFR ENEQVQERVM DSNDLERERG ITILAKNTAI TYKNIKINIV DTPGHADFGG EVERVLGMVD GVLLLVDSFE GTMPQTRFVL RKALQANLKP IVVINKIDRP EARPVEVVDE VLELFIELGA DDEQLDFPVV YASAREGYAL YNLNDDPKNL EPLFETLINH IPAPKGFMDK PLQLLVSNID YDDYVGRIAV GRIERGMIKT GQQAALCKKD GSIENVKISR LYVFSGLKRI EADSAMMGDI VAVSGISNIN IGETICNVDA PEPLPFIEIE EPTITMTFSV NNSPFAGREG TFVTSRHLRE RLFKELETNV SLRVEETDSP DSFKVSGRGE LHLSILIETM RREGYEFQVS KPNVILKEID GVLCEPVEYL IIDVPEEFMG VVMEKLGSRK AEMVNMHSSH QGYMRLEFKI PSRGLIGYRS EFLTDTKGNG IMNHIFHGFE PFKGEIPKRQ RGSMVAWEDG EAVTYGLYNA QERGTLFITP GTKVYEGMIV GENSRPEDIV INVCKKKHVT NMRAAGSDEA LRLTPPVILS LEQCLEFIED DELVEVTPKN IRLRKKILDT ELRAKTKARK KEQP
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