| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0998 |
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| Symbol | |
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| ID | 4811292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1195522 |
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| End bp | 1196796 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106416 |
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| Product | peptidase RseP |
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| Protein accession | YP_001037423 |
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| Protein GI | 125973513 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000230134 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT TATTGGTTAT TCTGGCTTTT GATTTTATCA TTATTATTCA CGAACTGGGA
CACTTTATTG TTGCAAAACT GTCAGGCATA AAAGTTGAAG AGTTTTCCCT CTTTGTAGGT
CCGAAGCTGT TTTCCGTCAC AATAGGCGAG ACGGCTTATA CGTTGCGTTT GTTTCCGATA
CTTGCCTACG TCAAAATGGA AGGTGAGGAA GAAGAGTCGG ACAGCGAGAG AGCCTTTAAC
AACAAGCCTG TCTGGGTGCG GGCCGCGGTG GTGGCGGCAG GACCTCTGGC CAATTTGATT
TCCGCGTTTC TGATAATATC GGTAGTGTAT TATACGACGG GTTATACCAC AAGAACCGTA
GGTTTGGTTC AGAAAGATTC TCCGGCTTAT AATGTAGGTA TCCGGGAAGG AGATGTTATT
GTCGGCTACG ACGGAAAAAG AATATATGAC CCGTTGGAAG TTATCCAGTT TTTATATGTA
TCAAAAGGGA AAGAAACCAC AATAGAGTTT GTAAGAAACG GAAAAGAGAT AAAAAAAGAT
ATTAAACCTA AGGTGGAAAG GACTTACCAG TTGGGATATT ATTCCTCCGC ATCGGGGGAG
AACTCCAATG TTATTGGGGA GTTGATTTAT GGCGGTGCTT TGGAAAAAGC GGGCGCCAAA
CCCGGAGATA AAATTGTGAA GTTAAATGAT GTTGAGGTTG AAAGCATTGA TGAGATAAAG
AATTTTTTAC AGGAAAATAA GAACCAACCG GTTAAGGTGA CTGTTTTGAG AGACGGGAAT
GAAATAGTCT TTAATGTTGT ACCGCAATTT GTGGAGAATT ATTCTCTTGG AATATCCTTC
TCCCGGGCAA AGGGTGGCAA TATTCTGAAT GTTTTAAAGA ACGGTGCGAT GTTTACCTAC
TCCAACATAC GCATGGTGCC TTACAGCCTT TACTGGCTTG TGACGGGCCA GGTATCCATA
AATCAGATGA CGGGTCCGGT GGGAATTGTG AGCACCATGA ATGATGTGGC GCAGCAAAGT
GATACCTTTA AGGATGCGGT GCTGAACATT CTTCTGTGGA CGGCTTTAAT AAGTGCCGCA
ATTGGTGCGA CAAACCTTGT ACCATTCCCG GCGCTTGACG GAAGCAAGCT TCTTATTCTT
GCCATTGAGG CGATAAGCAG AAGGAAGATT CCTGTGGAAA AGGAAGCAAT TATTACTTCA
ATAGGATTTA TTATTTTAAT AGGTCTTTCA ATATTTGTAA TGGCAAATGA CATAATTAGA
TTTATAATCA AATAA
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| Protein sequence | MRFLLVILAF DFIIIIHELG HFIVAKLSGI KVEEFSLFVG PKLFSVTIGE TAYTLRLFPI
LAYVKMEGEE EESDSERAFN NKPVWVRAAV VAAGPLANLI SAFLIISVVY YTTGYTTRTV
GLVQKDSPAY NVGIREGDVI VGYDGKRIYD PLEVIQFLYV SKGKETTIEF VRNGKEIKKD
IKPKVERTYQ LGYYSSASGE NSNVIGELIY GGALEKAGAK PGDKIVKLND VEVESIDEIK
NFLQENKNQP VKVTVLRDGN EIVFNVVPQF VENYSLGISF SRAKGGNILN VLKNGAMFTY
SNIRMVPYSL YWLVTGQVSI NQMTGPVGIV STMNDVAQQS DTFKDAVLNI LLWTALISAA
IGATNLVPFP ALDGSKLLIL AIEAISRRKI PVEKEAIITS IGFIILIGLS IFVMANDIIR
FIIK
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