| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0975 |
|---|
| Symbol | |
|---|
| ID | 4811269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1164781 |
|---|
| End bp | 1165932 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640106393 |
|---|
| Product | stage V sporulation protein E |
|---|
| Protein accession | YP_001037400 |
|---|
| Protein GI | 125973490 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA
[TIGR02614] cell division protein FtsW
[TIGR02615] stage V sporulation protein E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000101202 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCTG CAGCAATAAA ATCTTCAACA ATGAAATCTG CAATTACAAC TAAAAAGCCG
TTTGATTTTT TAATATTTCT GACTGTGTTG ATAATGCTTA CCATTGGTTC TATAATGGTA
TTTAGTTCCA GTGCTCCCCA TGCATATAAC TATATGAAAG GTGATTCGTA TCATTTTTTA
AAGAAGCAGT TGCTGTATGT TCCTGTGGGA CTTTTTGCGA TGTTTGTCAC AATGAATATT
GACTACAGAA AACTTGGTAA ATTGTCGCCC ATTATCATGC TTGTAAGTTT AGGGATGCTT
TCTGTTGTGT GGATTGACGG AATCGGTGCC ACCCGTAACA ATGCAACCCG GTGGTTTGAC
CTTGGATTTG TTGATTTTCA GCCTTCTGAA TTTGCCAAGC TGGCTATGAT ACTGTTTTTG
TCTTACAGTC TTTCTAAAAG GCAGGATAGC CTGAAGTACT TTTTCAGGGG TCTTGTTCCA
TACCTGATAC TGATAGGTAT TCATGCATTG CTGCTGCTTT TGGAACCCCA CATGAGTGCG
ACAATTATTA TAGGTTTGGT ATCGTGTGTA ATTCTTTTTT GCGCAGGAGC AAAGATAAAA
CATTTTGTAT TAATGGGAGT GCCTGCTGTT GCGGCGGTAA GTTATTTGAT TTTTACTTCC
GAATACAGGA TGAAAAGAGT TTTATCCTTT TTAAATCCGT GGGAAGACCC AAAAGGAGCA
GGATGGCAGG TTATACAATC CCTTTATGCC ATTGGTTCCG GCGGATTGTT TGGAAGAGGA
TTGGGAAACA GTCTTCAGAA GTTCCTTTAT ATTCCTGAAC CGTATAATGA CTTTATTCTG
GCGGTATTGG CCGAAGAATT GGGATTTATA GGAGTTGCCC TGGTACTTCT TTTGTTCCTT
ATCTTTATAT GGCGTGGAGT TAAAGTTTCC ATGAACGCGC CTGACGTTTT TGGAAGTCTG
GTCGCCATAG GAATAACTTC GCTGATTGCT TTTCAGGCGA TTATAAATGT TGCGGTTGTT
ACATCTTCCA TGCCGGTTAC GGGAATGCCC CTTCCGTTCT TCAGCTACGG AGGAACCTCT
CTTATTTTCC TGATGGCAGG AGTGGGCATA CTTCTTAATA TTTCCAAATA TGCAAATTAT
GAAAGAATCT GA
|
|---|
| Protein sequence | MKAAAIKSST MKSAITTKKP FDFLIFLTVL IMLTIGSIMV FSSSAPHAYN YMKGDSYHFL
KKQLLYVPVG LFAMFVTMNI DYRKLGKLSP IIMLVSLGML SVVWIDGIGA TRNNATRWFD
LGFVDFQPSE FAKLAMILFL SYSLSKRQDS LKYFFRGLVP YLILIGIHAL LLLLEPHMSA
TIIIGLVSCV ILFCAGAKIK HFVLMGVPAV AAVSYLIFTS EYRMKRVLSF LNPWEDPKGA
GWQVIQSLYA IGSGGLFGRG LGNSLQKFLY IPEPYNDFIL AVLAEELGFI GVALVLLLFL
IFIWRGVKVS MNAPDVFGSL VAIGITSLIA FQAIINVAVV TSSMPVTGMP LPFFSYGGTS
LIFLMAGVGI LLNISKYANY ERI
|
|---|
| |