Gene Cthe_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0961 
Symbol 
ID4811254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1151063 
End bp1152061 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content44% 
IMG OID640106380 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_001037388 
Protein GI125973478 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TTAATTTAGC AGTAGTCGGA GCCACCGGAA TGGTCGGCAG AACATTTATC 
AAAGTGCTGG AAGAAAGAAA CTTGCCTATC GATAACATAT ATTTCTTTTC TTCAAGTCGC
TCTGCTGGTT CGACTGTAAC TTTCAACAAC AAGGAATATG TGGTGGAAGA GCTCACCGAG
ACATCCTTTG ACAGAGGAAT AGACATAGCA CTGTTCTCCG CTGGAGCAAG TGTCAGTGAA
AAATTTGCAC CAATAGCGGC TTCAAAAGGC TGTGTGGTTG TGGACAACAG CAGCTGCTGG
AGAATGAACG AAAAAGTTCC CCTTGTAGTA CCGGAAGTCA ATCCCCAGGA CATTTCCTGT
CACCAGGGCA TCATAGCCAA TCCAAACTGC TCCACCATAC AGGCGGTTGT TGTGCTAAAG
CCCTTACATG ACAAGTATAA AATAAAAAGA ATAGTTTATT CCACATACCA GGCGGTATCA
GGAGCCGGGC ACAACGGATA CATGGACCTC GAAAACGGTC TTAAGGGAGA ACCTCCAAAG
AAGTTCCCTC ATCCGATAGC CGGCAACTGC CTGCCTCATA TTGACTCTTT CCTCCCTAAC
GGCTATACAA AGGAAGAAAT GAAAATGGTA AATGAGACAA GAAAGATATT GGGAGACTAC
AGCATCAGAA TTACCGCCAC AACCGTAAGA GTGCCCGTAT TCAACGGTCA CAGTGAATCA
ATAAACGTTG AGTTTGAAAA ACAGTTTGAC CTTGAAGAAC TCAAAGAAGT TTTAAGAAAT
GCACCGGGCG TCGTTGTTCA GGATGACGTT GCCAACAATG TTTATCCGAT GCCTATTTAC
GCAAGCGGAA GAGATGAAAC TTTTGTAGGA AGAATTCGTC GCGATGAAAG TGTTGAAAGC
GGCGTAAACC TCTGGGTTGT TGCGGACAAT ATAAGAAAAG GCGCTGCCAC AAACGCCGTT
CAAATTGCCG AAGAACTGAT TAAAATGTGG AATAAATAA
 
Protein sequence
MKKVNLAVVG ATGMVGRTFI KVLEERNLPI DNIYFFSSSR SAGSTVTFNN KEYVVEELTE 
TSFDRGIDIA LFSAGASVSE KFAPIAASKG CVVVDNSSCW RMNEKVPLVV PEVNPQDISC
HQGIIANPNC STIQAVVVLK PLHDKYKIKR IVYSTYQAVS GAGHNGYMDL ENGLKGEPPK
KFPHPIAGNC LPHIDSFLPN GYTKEEMKMV NETRKILGDY SIRITATTVR VPVFNGHSES
INVEFEKQFD LEELKEVLRN APGVVVQDDV ANNVYPMPIY ASGRDETFVG RIRRDESVES
GVNLWVVADN IRKGAATNAV QIAEELIKMW NK