Gene Cthe_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0954 
Symbol 
ID4811247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1143701 
End bp1144255 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID640106373 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_001037381 
Protein GI125973471 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.511342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATA AGGCTGAAAT AATGGATGAA AGCGCAATTA TGAGAGCCAT AACCAGAATA 
GCCCACGAAA TTATTGAGAA AAACAAGGGC GTTGACAACC TTGCTTTAAT CGGCATTCAA
AGGCGTGGAG TGCCTCTTGC AAAGATGATT GCGGAAAAAA TCAAGGGTGT TGAGGGAAAG
AGCGTTCCGG TGGGTATTCT CGATATAACT CTCTACAGAG ATGATTTGAG CATGCTTTCC
GAGCATCCGA TAATAAACGG AACACAAATA GATTTTCCGA TAACCGACAA GAAAATAGTC
CTTGTGGATG ATGTGTTGTA TACGGGAAGG ACGGTAAGAG CGGCGATTGA CGCTTTGATG
GATGCTGGAA GACCTAAAAT GGTTCAGCTT GCAGTGTTGA TTGACAGGGG TCACAGGGAG
CTTCCGATAC GGCCGGATTA TGTCGGAAAG AATGTTCCAA CCTCCAGGCT TGAAGTGGTG
AACGTAAAAC TTTATGAGAT TGACGGAGTA AATTGTGTAA CTATAAGTGA TATAGAAAAA
GGCGTAAGAC ATTAG
 
Protein sequence
MIDKAEIMDE SAIMRAITRI AHEIIEKNKG VDNLALIGIQ RRGVPLAKMI AEKIKGVEGK 
SVPVGILDIT LYRDDLSMLS EHPIINGTQI DFPITDKKIV LVDDVLYTGR TVRAAIDALM
DAGRPKMVQL AVLIDRGHRE LPIRPDYVGK NVPTSRLEVV NVKLYEIDGV NCVTISDIEK
GVRH