Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0953 |
Symbol | pyrB |
ID | 4811246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1142483 |
End bp | 1143421 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640106372 |
Product | aspartate carbamoyltransferase catalytic subunit |
Protein accession | YP_001037380 |
Protein GI | 125973470 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0935774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA AATCAAAAGA CCTCTTAGGA CTTAAGGATT TAACGGCAGA AGAAATACAA TACATTTTAA ATACTGCAAA AACAATGAAG GTTATTCTTT TATCCAAAAA CAAGAAGGCT CCTCATTTGC AGGGAAAATC AATAATTACC CTGTTTTATG AGAACAGCAC AAGAACAAGA TTATCCTTCG AGCTTGCTTC AAAATACTTA AGTGCCAATG CAGCAAATAT TTCGGTGGCC GCAAGCAGCG TTGCCAAAGG TGAAACACTT ATAGACACCG GAAAGACAAT TGACATGATG GGTGCGGATG TAATCGTAAT AAGGCATTCC ATGTCGGGAG CGCCTCACCT TCTTGCCAGG AATGTAAAGG CATCGGTAAT AAATGCAGGT GACGGTATGA ATGAACATCC TACCCAGGCA CTTCTTGACA TGTTCACTAT TATTGAGAAA AAAGGAAGTC TTAAGGGGTT GAAGGTTGCC ATAATCGGTG ATATATATCA CAGCAGAGTG GCAAGGAGCA ACATCTGGGG GATGACCAAG CTTGGTGCAG AAGTAAGTGT TGCAGGACCC TCCACCCTTA TGCCTCCGGA ATTGGACAAG ACCGGCGTGA AAGTCTTTAC CACTGTCCAG GAAGCTTTGA TTGACGCAGA TGTGGTTATG GGACTTAGAA TTCAGAAGGA AAGACAAAAA AGTGGCTTGT TCCCGAGCCT GAGAGAATAT TCGAGATTTT TCGGATTGGA TGAAAAGCGC TTGAAACTTG CAAAAGAGGA TGCTCTGATA CTGCATCCGG GACCGGTTAA CAGAGGAGTT GAATTACCGT CGTCGGTAAT CGATTCCGAA AGGTCGTTTA TAAACGAACA GGTTACCAAC GGAGTTGCTG TAAGGATGGC TCTTCTTTAT CTTTTAACAA GGAGGGATAG CGGTGAGAGT GTTAATTAA
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Protein sequence | MILKSKDLLG LKDLTAEEIQ YILNTAKTMK VILLSKNKKA PHLQGKSIIT LFYENSTRTR LSFELASKYL SANAANISVA ASSVAKGETL IDTGKTIDMM GADVIVIRHS MSGAPHLLAR NVKASVINAG DGMNEHPTQA LLDMFTIIEK KGSLKGLKVA IIGDIYHSRV ARSNIWGMTK LGAEVSVAGP STLMPPELDK TGVKVFTTVQ EALIDADVVM GLRIQKERQK SGLFPSLREY SRFFGLDEKR LKLAKEDALI LHPGPVNRGV ELPSSVIDSE RSFINEQVTN GVAVRMALLY LLTRRDSGES VN
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