| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0931 |
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| Symbol | rnc |
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| ID | 4811224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1119409 |
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| End bp | 1120119 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106350 |
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| Product | ribonuclease III |
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| Protein accession | YP_001037358 |
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| Protein GI | 125973448 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000194117 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTGATT TGGAAAGTTT TATGGGCATG ATAAACGAAC TGGAGAGAGT TATTGATTAT
TGTTTTGAGG ACAAGATGAA GCTTGTACTG GCTCTCACTC ACAGTTCCTA TGCCAATGAA
TGCAGGGATG AAAGAATAAC CAGCAATGAA AGGCTTGAAT TTTTGGGAGA TACCGTTTTA
AACATGGTTG TAAGCGAATA CATTTATAAA AACTGTTCAT ATCTGGCTGA AGGGGAAATG
ACAAAGTTTA GAGCCAATGT GGTATGCGAA CGTACTTTGG CTGAGTGTGC GCAGAACCTA
AGTATTGGGA AATACCTTCT TCTCGGAAAA GGCGAGGAGA ACACCGGTGG AAGGACGAGG
GTTTCCATAC TTTCAGATGC CGTTGAAGCG TTAATAGGGG CTATATACAT TGACGGAGGT
TTGGAAAGTG CGAGGACTTT CATATTGAAC CAACTGGAAA AAACAATAGA AAAATCCATT
CAGGGAACTA TTTTTATGGA TTATAAGACC CAGCTGCAGG AGATTATTCA AAAGACCAAT
GAACATAAGA TTGCGTATGA GATAATTGAG GAAAAGGGGC CTGACCACAG CAAAGTGTTC
GTTGCCCAGG TAAAAGTGGA TGAAAAAGTG GTAGGTGTCG GTGAAGGCCG GACCAAGAAA
GAAGCTGAGC AAATGGCTGC AAAATCGTCT TTGGAGAATA TTAATGCGTA A
|
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| Protein sequence | MFDLESFMGM INELERVIDY CFEDKMKLVL ALTHSSYANE CRDERITSNE RLEFLGDTVL
NMVVSEYIYK NCSYLAEGEM TKFRANVVCE RTLAECAQNL SIGKYLLLGK GEENTGGRTR
VSILSDAVEA LIGAIYIDGG LESARTFILN QLEKTIEKSI QGTIFMDYKT QLQEIIQKTN
EHKIAYEIIE EKGPDHSKVF VAQVKVDEKV VGVGEGRTKK EAEQMAAKSS LENINA
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