| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0928 |
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| Symbol | pdxA |
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| ID | 4811221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1116555 |
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| End bp | 1117577 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640106347 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001037355 |
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| Protein GI | 125973445 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000115912 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATAAGC CGATAATAGG AGTACCCCTT GGAGATATAG CGGGTATCGG TCCGGAGATA
GTGGTAAAGG CACTAAAGGA AGAAAGTATT TACCGATTTC TCACACCGGT TGTTATAGGC
TCAAAGGATG CAATCTGTCA GGCATTGGAG ATTTGCGGGC TTGACAGTCG TATAAACGTT
GTGGATGAGA CTTTGAGCAA AGTTGTATCC GACAGCAGTA CGATTAATCT TGTTGACACA
GGGAACATTG GTGTGGCAGG CATAAAAATG GGACAGGTCC AGGCACAATG TGGAAAAGCG
GCTTTCGATT ATATCAAGCG AACCGTAGAA CTTGCCATGG ACGGAAAAAT AGATGCTGTG
GCTACTACCC CCATAAACAA AGAATCATTG AAAATGGCGG GAATAGACTA TATCGGGCAT
ACGGAAATTT TAGCGGGGCT TACCGGCACC AAGGACCCTT TGACCATGTT TGAAGTGGGA
AACTTAAGGA TATTTTTCCT AAGTCGGCAT GTTTCTTTAA GACAGGCATG TGATCTTGTC
ACAAAAGAAA GAGTGCTGGA CTATATTGAA AGATGCACAA GAGCATTAAA GCTTTTGGGT
ATCAGTGAGG GAACGATGGC GGTGGCCGGG CTTAATCCCC ACAGCGGAGA GAATGGACTT
TTTGGCCGTG AGGAGGTTGA CTTTGTGGTG CCTGCCATAA AAGAAGCAAT TTTAAAAGGC
TATCGTGTGG AGGGCCCCAT TGGGGCTGAC TCGGTGTTTT ATCTTGCAAG TAAGGGAAAA
TACAACTCAG TACTTTCTCT TTATCATGAC CAGGGGCATA TTGCCGCCAA AACATTGGAT
TTTGAAAGGA CAATTTCGGT TACCATAGGT CTTCCTTTCT TAAGGACGTC TGTGGATCAC
GGTACGGCTT TTGACATTGC CGGTACGGGA AAAGCCAGCG CCGTAAGCAT GGTAGAGGCT
TTGCTTGTTG CCGGAAAATA TGCCCGAAAT TATAAAGTCA ACTACAAAAA CAATATTTTG
TGA
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| Protein sequence | MDKPIIGVPL GDIAGIGPEI VVKALKEESI YRFLTPVVIG SKDAICQALE ICGLDSRINV
VDETLSKVVS DSSTINLVDT GNIGVAGIKM GQVQAQCGKA AFDYIKRTVE LAMDGKIDAV
ATTPINKESL KMAGIDYIGH TEILAGLTGT KDPLTMFEVG NLRIFFLSRH VSLRQACDLV
TKERVLDYIE RCTRALKLLG ISEGTMAVAG LNPHSGENGL FGREEVDFVV PAIKEAILKG
YRVEGPIGAD SVFYLASKGK YNSVLSLYHD QGHIAAKTLD FERTISVTIG LPFLRTSVDH
GTAFDIAGTG KASAVSMVEA LLVAGKYARN YKVNYKNNIL
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