| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0904 |
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| Symbol | |
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| ID | 4810525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1080830 |
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| End bp | 1082167 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106323 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001037331 |
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| Protein GI | 125973421 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000019832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATGGA GCAGCGGGAT TAAATTCTTC TTGGTTTTGG CAGTTATTGC AGCGATGACC
GCAATTGTTT TTACTGGATT AAAAATTCCG AATACGGATT TTGTTATACC CAAGGCGTAT
GACGGTATCC GATACGGAAT TGATATAAGC GGTGGAGTAA GTGCTGTTCT TACGGCTCCG
GATGGGATAA CGCCAACTGA TGACGAACTG GATACTGTAA AAGGCATAAT TGATACAAGA
CTTGAAGGAA AGCAGATTTA TGACAAGACT GTAACGGTGG ACAGGGTTAA CAAAAGGGTA
CTTGTTGAAA TACCTTACAA AAAAGACGGT GAATATGGCG ATCCCTATGA AACAATTGCC
GATATTGGTG CTACGGCAAT GCTGACTTTC AGAGAAGTTG ACGAGGATAA GGTGGACCCT
GAAACCGGGG TTTATGAAAT GACCGACAGG ATAGTACTTC AGGGTAATGA CATAGAAAGT
GCCGTGGCTG AGACGGACCC TCAAACCCAA TATGGTATTG TAAGGTTGAT ATTCAGTGAT
GAGGGAGCCA AAAAGTTTGA AGAGGCAACC GAAAGACTGG TAGGGAAAAG AATTGCCATA
TATCTTGACG ACCAGATGAT TTCAGCTCCC ATAGTTAACG AAAAAATAAG CGGAAAGGAT
AGAGCGGTAA TCAATCTTGG GTTCATCGAC AGAAATGAAT CAATTGAATA TGCAAAAGAA
CTTGCTGCCA TAATCAGATC CGGTGCCCTG CCTTTCAAGC TTGAGGCAAA GGATGTGAAC
CACATCAGCC CGATTATCGG TGAGAGTGCG CTTAATATAA GTATATATGC CGGAGCGGTT
GCAATTATTC TGGTATGGCT GTTTATGCTG CTTTATTACA GAGTTCCGGG ATTGGTTGCA
GATATTACAC TTCTTGGACA GGTTGCGGCT ATTATATTAG TATTTGTTTT AAGCGGCATG
TCCCTCACTC TTCCCGGTAT AGCAGGTTTG ATTCTTACTG TGGGTATGAG CGTTGATGCC
AATGTAATTA TATTTGAAAG AATCAAGGAA GAGCTCAGGA GCGGCAAAAC AGTTCAAGCT
GCCATTGAAT TGGGCTTTAA GAGAGCATTT ACCGCTATAC TTGACGGTAA CTTGACCACA
TTGATAACTG CTGCGGTTCT TTATTACTTT GGAACAGGAG CGGTTAGATC CTTTGCCATT
ACCCTTGGAC TAGGTATAAT TGTCAACTTT ATTACTGCCA TAGTTGCAAC AAAAATTGTG
TTGAACGCAT TGTCACAAAT ACGTGTTTTA AGAAAACCGT GGCTTTTTGG GGCTAAAGGA
GGTACTGCAA ATGTTTAA
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| Protein sequence | MRWSSGIKFF LVLAVIAAMT AIVFTGLKIP NTDFVIPKAY DGIRYGIDIS GGVSAVLTAP
DGITPTDDEL DTVKGIIDTR LEGKQIYDKT VTVDRVNKRV LVEIPYKKDG EYGDPYETIA
DIGATAMLTF REVDEDKVDP ETGVYEMTDR IVLQGNDIES AVAETDPQTQ YGIVRLIFSD
EGAKKFEEAT ERLVGKRIAI YLDDQMISAP IVNEKISGKD RAVINLGFID RNESIEYAKE
LAAIIRSGAL PFKLEAKDVN HISPIIGESA LNISIYAGAV AIILVWLFML LYYRVPGLVA
DITLLGQVAA IILVFVLSGM SLTLPGIAGL ILTVGMSVDA NVIIFERIKE ELRSGKTVQA
AIELGFKRAF TAILDGNLTT LITAAVLYYF GTGAVRSFAI TLGLGIIVNF ITAIVATKIV
LNALSQIRVL RKPWLFGAKG GTANV
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