Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0889 |
Symbol | |
ID | 4810507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1065448 |
End bp | 1066437 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640106305 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001037316 |
Protein GI | 125973406 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACT GTGGCGAAAT AATCGAATTG ATGTCTTTAT ATATAGATGG TGAACTGGAC AGTGAAACTA AAAGGGAGTT TGAAGAGCAT ATAGAAACTT GTGAAAGCTG TAGAAGTGAG CTTTACGAAT TGAAAGAAAT TGTGGATGTG TTGGGAGAAG TTGAGGAGGT TGAGCTTCCT TCAGGATTTA AAGAGCAGCT TCACGAGAAA CTTGTGGCGG AAAAGAAGAA AAATGAATCA GAGAGCAAAA TTTTGTCTTT CAGGAAAAAG TTTATTGGTT TTGCACCTTC CATTGCCGCC GGACTTGTTT TGGTTTTTGT TGCCGCAAGC CTGATTATAA CCCGGGGATT GTTTGGCAAT GTTCCAAGTA CCAACACCGG TGGTTCGATG GGTATTGAAT ACAGCGGAAT GATGGAATCT GATCAAAAAA ATAATAAAGA TGGTCAGTAC AACGGATTGA AAAACGAGGA AGATTCTCAA GTAAGCGTTT TATTCAATGA AGAACCCGGA GCAACTCAAA GCCAAAAGTT TTATGACGGA GCTGAAGATT CTCTCCAAAA GGAAAAATCG GAAGATGCCC GGAAGATTGA AAATTCATCT TTTTATGAAA TAACTTCTTC TTCAGATGTT CCTGCTTCAG AACAGCCGCA GAAGACTTAC AGTATTGCTG CAACCGGCAT GACTGTTTAT GATGTGAATA TTACAGTAAA TTCACCGGAT CTTGAAAAAG ATACGGATAA CATTATTAAT ATTGCCCGTT CGTGCAACGT GGAGATTGAA GTCGAAATAG AAAAATCCGG TCATAAAAGT GTTGCTCTTT CCGGATTGGA TGAAAATAAA AATACGCTGA ATTTCAGTAT GGATGCTGCG ACATATGAAA ATTTTATAAG TAAACTAAAA GAAGAATATG GAAGCAAACT CTCCCTGGAT GAAAAGACGG ATGACAGTGA AAAGACAAAA AGAGTAGAAA TAACAATATT TAAGGAGTAG
|
Protein sequence | MKNCGEIIEL MSLYIDGELD SETKREFEEH IETCESCRSE LYELKEIVDV LGEVEEVELP SGFKEQLHEK LVAEKKKNES ESKILSFRKK FIGFAPSIAA GLVLVFVAAS LIITRGLFGN VPSTNTGGSM GIEYSGMMES DQKNNKDGQY NGLKNEEDSQ VSVLFNEEPG ATQSQKFYDG AEDSLQKEKS EDARKIENSS FYEITSSSDV PASEQPQKTY SIAATGMTVY DVNITVNSPD LEKDTDNIIN IARSCNVEIE VEIEKSGHKS VALSGLDENK NTLNFSMDAA TYENFISKLK EEYGSKLSLD EKTDDSEKTK RVEITIFKE
|
| |