Gene Cthe_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0860 
Symbol 
ID4810478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1035112 
End bp1035705 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content41% 
IMG OID640106276 
Productrubrerythrin 
Protein accessionYP_001037287 
Protein GI125973377 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.069269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTC TTAAAAACAC AAAAACAATG GAAAATCTTA TGAAGGCGTT TGCCGGAGAA 
TCCCAGGCTC GCACAAGGTA CAATTTTTAC GCTTCTGTTG CCAATAAGGA AGGTTACAGA 
CAGATTGAGG CTATTTTTAA TGAAACCGCC GACAATGAAA AGGAACATGC AAAAAGGTTT 
TACAAATTTC TTCTTGAGGG GTTGAACGGT GAGCTGCCTG CTTCAATTAT GATAAATGCA 
GATTACCCTG TGGCTTACGG AAACACTTTG GACAACCTCA AGGCGGCAGC AGCGGGGGAA 
AATGAAGAGT GGACAAAGCT TTATCCGGAA TTTGCGAAAG TTGCAAAAGA AGAAGGTTTT 
GATGAAATAG CGGCAGCTTT CACAAAAATA GCCGAAGTTG AGCAAAGGCA TGAGGCAAGA 
TACAAGAAGC TGGCGGAAAA CATTGAAAAT AACAAGGTGT TTAATAAAGA CGAGAAAGTT 
TTATGGAAAT GCAGAAACTG TGGTTATGTG CATGAAGGAA ACAGCGCACC GGAAAAATGT 
CCGGCATGTG CTCATCCAAA AGCATTTTTC GAAGTGCTGG CAGAAAATTA TTAA
 
Protein sequence
MKSLKNTKTM ENLMKAFAGE SQARTRYNFY ASVANKEGYR QIEAIFNETA DNEKEHAKRF 
YKFLLEGLNG ELPASIMINA DYPVAYGNTL DNLKAAAAGE NEEWTKLYPE FAKVAKEEGF 
DEIAAAFTKI AEVEQRHEAR YKKLAENIEN NKVFNKDEKV LWKCRNCGYV HEGNSAPEKC 
PACAHPKAFF EVLAENY