Gene Cthe_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0799 
Symbol 
ID4810417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp966229 
End bp966906 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content38% 
IMG OID640106216 
Producttwo component transcriptional regulator 
Protein accessionYP_001037227 
Protein GI125973317 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TGCTTGTCGA AGATGAAGTA CGCCTTTCCG AAGCACTTGT ACATACTTTA 
AAAAAGAACA ATTACATAGT TGACGTCGCT TTTGACGGGA TAACAGGCCA GCAGATGGCT
GAGACAAATA TGTACAACGT CATTATCCTT GACAGAATGT TGCCCAAAAA AGACGGGCTT
GACGTTTTAA GAGATCTCAG AAAACAGGGT GTCACAACTC CTGTTCTGAT TCTAACCGCC
AAAGATTCGG TAAAAAACAG AGTTGAAGGT CTTGACAGCG GCGCCGACGA TTATCTGACA
AAACCTTTTT CCAAAAGCGA ATTACTTGCA AGAATACGAG CTTTGGGAAG AAGACAAAGC
GAAATATTTG TAAATGAAGA AATAAATATA GGAAACATGA GCTTTAACTG CATGAAGGGA
GAAATAAAAG TAAACGGGCA AACCATAAAA CTTACGTCAA AAGAATCGCA AATTTTGGAA
ATACTCATTA AAAACAAAAA CATAGTGGTT TCAAAAGAGC AACTCCTTGA GAAAGTATGG
GGCTTTCAAA CAGATATTGA GCTTAACAAT ATTGAAGTAT ATCTCTCATA TCTTAGAAAA
AAACTTTCAA AACTGGACTG CGGAATTGTG ATTGAGACAA TAAGAGCAAG GGGCTATTGC
CTTAAGGAGG CACTGTAA
 
Protein sequence
MKILLVEDEV RLSEALVHTL KKNNYIVDVA FDGITGQQMA ETNMYNVIIL DRMLPKKDGL 
DVLRDLRKQG VTTPVLILTA KDSVKNRVEG LDSGADDYLT KPFSKSELLA RIRALGRRQS
EIFVNEEINI GNMSFNCMKG EIKVNGQTIK LTSKESQILE ILIKNKNIVV SKEQLLEKVW
GFQTDIELNN IEVYLSYLRK KLSKLDCGIV IETIRARGYC LKEAL