| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0795 |
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| Symbol | |
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| ID | 4810413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 959624 |
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| End bp | 961351 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640106212 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001037223 |
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| Protein GI | 125973313 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTG AGGCAATATA TCACAAACCT TACAGCGAGT TTGCATTTCC TGTTGCTCCC
GACACTCTGG TAATACGGCT CAGGACGGCT AAAAACGATG TAAACACCTG CATTCTCATC
TATCATGAAA AGTATGATAC GTCACAAAGA GGAAAAGTGA AAATGGATAA AGTTGCAAGC
GATGGAATGT TTGACTATTA CGAGGTGGAG CTTAATGTCG GTATAAAGAG AATTAAGTAT
ATGTTTTATC TTGAGGATAA TTATTCAATA AAATGGTACA GCAGCGACGG ATTTTTTGAT
TATATGCCTC AGTGGGGACA TTTTACCTAT TCTTATATAT GCAAAGACGA CATATTTCAT
GAGGTTGAAT GGTTTCGTAA TTCAACAATA TATCAGATAT TTCCCGACAG ATTTGCAAAG
TTTCCGCCGG ATACCGAAAA TTCGGGCAAA AGAACGATAC ATGGGGGCAA TATTAAAGGG
ATAATCGACC GGTTTGATCA TTTAGTCAAA CTTGGAGTTG ATGTGGTTTA TTTAAATCCC
ATATTCAAAT CGGAATCTTA TCATCGCTAT GATGTTGTCG ATTATTATGA AATTGACCCG
ATGTTTGGAA GTAAAGAAGA GCTCAGGGAA TTGATGGACT TGTGTCACAA AAACGGTATA
AAAGTAATAT TTGACGGAGT TTTTAATCAC TCCGGAGACA AGTTTTTTGC ATTCAGAGAT
GTTGTGGAAA AAGGAGAAAA ATCAAAGTAT GCAAACTGGT ATTTTATAAA TTCTTTTCCC
GTTCAGGGAT ATCCAAGACC CAATTATGAA TGCTTTTCCT TTTATGGAGG AATGCCGAAG
CTTAACACCG GAAATCCTGA GACGGCAAAA TACTTTCTTG ATGTGGTAAA GTATTGGACA
GTGGAGTTTG GGGTGGACGG ATGGAGACTT GATGCGGCGG ATGAGGTGGA CCGAAAGTTT
TGGAGAAAGC TTAGGGATAT GCTGAAAGAT TTGAACAAGG ATGTGGTGCT GATTGGCGAA
ATATTTGACG AGGCGTCTTC GTGGCTTTGG GGAGACCAGT TTGACTCGGT GATAAATTAT
CCGTTGAAAG CCATGATAAA TGACCTTTTT GCCTATAGGT CCATTGATGT GGAGACTTTC
AGGAACAGAA TAAGCGGCTA TATTATGAAG TTTAACAAAA AGGTGCTAAG CAGCCTGGTA
AATATAATAA GCACTCATGA CACGCCAAGG TTTTTGACTC TTTGCAACGG AGATGAAAAG
AGGTTTGAGA TGGCAGTAGT GTTCCAGTTT ACCTTTCCTG GAGTTCCCCT CATATACTAC
GGCGATGAAA TAGGGATGGA AGGCGAAGGA GACCCTGATT GCAGAAGACC GATGATATGG
GACGAAGCGA AATGGAACAA AAAAACTCTC GAGTTGTATA AATTCCTGAT TGGCTTGAGG
AAGAGGTTCG ATGCCTTGAG AACTGGAGAA TATGGAGAAC TTCCTGTAAC AGGATGCAAT
GGGATACTGG CATACAGAAG GGGCCGGGGA GAAAACGGAA TTATTGTTGC CATGAATACA
TTGGACCGAA AGGAAAATGT CGTAGTAGAA ACAGGAGATT CTTTTGACAC GGTAAAAGCT
TTTGAGTCTT TGAAAGACGA AGAAAGACTG AATGTTGACA AAAAAAGGAT AAACATATGC
TTAAATCCGT TTGAGTGGAG GATTTACAAA GCCTGCGGCG AATTATAA
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| Protein sequence | MKLEAIYHKP YSEFAFPVAP DTLVIRLRTA KNDVNTCILI YHEKYDTSQR GKVKMDKVAS
DGMFDYYEVE LNVGIKRIKY MFYLEDNYSI KWYSSDGFFD YMPQWGHFTY SYICKDDIFH
EVEWFRNSTI YQIFPDRFAK FPPDTENSGK RTIHGGNIKG IIDRFDHLVK LGVDVVYLNP
IFKSESYHRY DVVDYYEIDP MFGSKEELRE LMDLCHKNGI KVIFDGVFNH SGDKFFAFRD
VVEKGEKSKY ANWYFINSFP VQGYPRPNYE CFSFYGGMPK LNTGNPETAK YFLDVVKYWT
VEFGVDGWRL DAADEVDRKF WRKLRDMLKD LNKDVVLIGE IFDEASSWLW GDQFDSVINY
PLKAMINDLF AYRSIDVETF RNRISGYIMK FNKKVLSSLV NIISTHDTPR FLTLCNGDEK
RFEMAVVFQF TFPGVPLIYY GDEIGMEGEG DPDCRRPMIW DEAKWNKKTL ELYKFLIGLR
KRFDALRTGE YGELPVTGCN GILAYRRGRG ENGIIVAMNT LDRKENVVVE TGDSFDTVKA
FESLKDEERL NVDKKRINIC LNPFEWRIYK ACGEL
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