Gene Cthe_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0731 
Symbol 
ID4810349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp888602 
End bp889114 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content39% 
IMG OID640106148 
Productshikimate kinase 
Protein accessionYP_001037159 
Protein GI125973249 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000355155 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA GAAACATAGT CTTAATCGGT ATGCCCAGTT CCGGTAAAAC TACAATTGGG 
CAACCACTTG CAAAAACTCT CAACATGGGT TTTATAGATA CTGATAGAAT AATAATGGAG 
AAAGAAAAAA GGCCGCTTAG AGACATCGTA AATCATGACG GGCTGGAAAA GTTCCTTGAG 
ATACAGCAGT CAACTTTAAT GAGCCTGAAC GTGGACAACC ATGTCATATC AACCGGCGGC 
AGTGTCGTTT ACAATGAAGC CGCAATGGAA CATCTTAAAA GAAACAGCAT TGTGGTGTAC 
CTTAAACTGG AATTTGATGA AATTAAAAAA AGACTGTCTT CCGGCAGAAG GCTTGCAAGA 
GACAGTAACA AGAGCTTTGA GGATGTTTAC AAAGAGCGGG TGCCTTTGTA TGAAAAGTAC 
GCCGACGTTA CAATCGACTG TTCTTCTAAA AATGTTCAGT CAATTGTTGC GGAAATTAAA 
AATGTTTATG AAAGCATGAT AAAGGGAATA TAA
 
Protein sequence
MQKRNIVLIG MPSSGKTTIG QPLAKTLNMG FIDTDRIIME KEKRPLRDIV NHDGLEKFLE 
IQQSTLMSLN VDNHVISTGG SVVYNEAAME HLKRNSIVVY LKLEFDEIKK RLSSGRRLAR 
DSNKSFEDVY KERVPLYEKY ADVTIDCSSK NVQSIVAEIK NVYESMIKGI