| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0728 |
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| Symbol | xerC |
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| ID | 4810346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 884687 |
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| End bp | 885679 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640106145 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001037156 |
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| Protein GI | 125973246 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.442089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGGG CGTATTATGG TGAGGCACCT GCTATAATAA AAGACTTTTT AAGCTACATG
GAGACCATAA GAGGTAAATC GAAAAACACA ATCCATGAAT ACTATTATGA TCTAAGGCTT
TTTTTCAGGT TTATGAAAAT TCATTTTGGT CTGGAGGACT CAAAAAAAGA TTTTGACTCA
ATAGATATCA AAGACATGGA TATTGATGTC ATTAAGAAAA TAACTTTGAG TGATATTTAT
TCCTTTATGT CATTTTTAAG CCGTGAAAGG GACAATACCG CGAGCTCGAG GGCAAGAAAA
GTTGCAAGCA TAAGGTCGTT TTTTAATTAC CTTACAAACA AGGCAAAGCT TTTAGAGCAA
AATCCTGCTG CCGAGCTGGA GTCTCCCAAA ATAATGAAAA GGCTTCCAAG GTATCTTAAC
ATTGAAGAAA GCAAAAGGCT GCTTGGTTCC ATTGACGGAG AGCATAAAGA AAGAGATTTT
GCAATTATAA CTTTGTTCTT AAATTGTGGT TTGCGACTTT CCGAGCTTGT AAACATTAAT
TTGAGCAATA TAAAAAATGA TGTTTTAACT GTGGTGGGCA AAGGCAACAA AGAACGTACC
ATTTACCTTA ATGCGGCATG CAAAAAAGCT CTTGATGCAT ACTTGAAGGT TCGGCCCGTT
GACGGTGTGA AGGACAAAAA TGCTTTGTTT TTGAGTTCCA GAAAGCAAAG AATAAGCAAC
AAGACTGTTC AGCATATCGT GAAAAAGTAT ATAAAAGCTG CGGGACTCGA CCCGGAAAGG
TATTCTACCC ATAAACTCAG ACATACGGCG GCAACGTTAA TGTATAAACA CGGCAATGTT
GACATAAGGG CACTTCAGGA AATACTAGGG CATGAAAGCA TAGCAACAAC GGAGATTTAT
ACCCATGTGG ACAGCCAGCA GTTGAAAAAT GCCGTTGAAA GCAATCCTTT ATCAACTTAT
GTCGATGAGC ATGACAATGA AAATGAGAGC TAA
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| Protein sequence | MNGAYYGEAP AIIKDFLSYM ETIRGKSKNT IHEYYYDLRL FFRFMKIHFG LEDSKKDFDS
IDIKDMDIDV IKKITLSDIY SFMSFLSRER DNTASSRARK VASIRSFFNY LTNKAKLLEQ
NPAAELESPK IMKRLPRYLN IEESKRLLGS IDGEHKERDF AIITLFLNCG LRLSELVNIN
LSNIKNDVLT VVGKGNKERT IYLNAACKKA LDAYLKVRPV DGVKDKNALF LSSRKQRISN
KTVQHIVKKY IKAAGLDPER YSTHKLRHTA ATLMYKHGNV DIRALQEILG HESIATTEIY
THVDSQQLKN AVESNPLSTY VDEHDNENES
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