Gene Cthe_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0721 
Symbol 
ID4810339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp875842 
End bp876291 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID640106138 
Productnitrogen-fixing NifU-like protein 
Protein accessionYP_001037149 
Protein GI125973239 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU
[TIGR03419] FeS cluster assembly scaffold protein NifU, Clostridium type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0316213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTATA GTGAAAAGGT CATGGATCAT TTTATGAATC CCAGAAACGT GGGAGAAATT 
GAAAACGCCG ACGGTGTCGG CGAAGTCGGC AATGCAAAGT GCGGAGATAT AATGAAGATG 
TATCTCAAAA TTGAAAACGA TGTAATAGTT GACGCAAAGT TTAAAACCTT CGGCTGCGGA 
GCGGCAGTAG CCACAAGCAG TATGGCAACG GAGCTTGTGA AGGGTAAAAC TATTGAAGAA 
GCTCTCAAAA TAACCAACAA AGCCGTTGCA GAAGCTTTAG ACGGGCTTCC TCCCGTTAAA 
ATGCACTGCT CAAATCTGGC AGAAGAAGCC ATCCGTGCCG CAATTGATGA TTACAGACGC 
AAAAATGGGC TTCTTCCCGA AGGCAGTGAA AACAATGCTT GCGGAAGAAG ATGTGATGAC 
ATACATCACG GTATTGATGA CGAAGATTAA
 
Protein sequence
MMYSEKVMDH FMNPRNVGEI ENADGVGEVG NAKCGDIMKM YLKIENDVIV DAKFKTFGCG 
AAVATSSMAT ELVKGKTIEE ALKITNKAVA EALDGLPPVK MHCSNLAEEA IRAAIDDYRR 
KNGLLPEGSE NNACGRRCDD IHHGIDDED