Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0693 |
Symbol | |
ID | 4810311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 851521 |
End bp | 852240 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640106110 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_001037121 |
Protein GI | 125973211 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGA TGAGGCTTCA AAAGTACCTT GCTGAATGCG GTGTTGCATC AAGAAGAAAG GCGGAAGAGC TGATAAGCCA GGGCAGAGTC AAGGTTAATG GTGAAACGGT CACGCAAATG GGGAAAAAGG TTTCCCAAAA CGATGTGGTG GAAGTTGATG GAAAGCTGGT CAAAATGGAG AAAAGAAAGG TTTATATAGC ATTAAATAAA CCGGTGGGGT ACATAAGCTC GGTAAAAGAT CAGTTTGGCA GAAAAACGGT GATGGATCTG GTCAAGGATA TAAAGGAAAG GATTTTTCCG GTGGGAAGAC TTGATTATGA CACCTCCGGT CTTTTGCTGC TTACCAATGA CGGAGATTTT GCCTACAGGC TTACTCATCC TAAGCATGAG ATAAAAAAGG TCTATGAGGC TGATTTACTG GGTGTACCTT CAAAGGACGA CATAATGCGT TTTAAAAATG GGTTATGGAT TGATGATTAT TTTACAAGTC CGGCCGATTT TGAAATTTTG AAAAGTGACG GTAAAACGAC GAAAGTTAGA ATAACCATAC ACGAAGGAAA GAACCGTCAG GTAAGGAAAA TGTGTAATAA GATAGGCTGC CCGGTAATAA GGCTCAAAAG AATCTCCATC GGTGAGGTAT CCCTGGGTGA TTTAAAGGAA GGCTCCTGGA GGAACTTGAC TGAGAGGGAG ATAAACTCTT TTTTGGATAA TCAAAAGTAA
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Protein sequence | MKEMRLQKYL AECGVASRRK AEELISQGRV KVNGETVTQM GKKVSQNDVV EVDGKLVKME KRKVYIALNK PVGYISSVKD QFGRKTVMDL VKDIKERIFP VGRLDYDTSG LLLLTNDGDF AYRLTHPKHE IKKVYEADLL GVPSKDDIMR FKNGLWIDDY FTSPADFEIL KSDGKTTKVR ITIHEGKNRQ VRKMCNKIGC PVIRLKRISI GEVSLGDLKE GSWRNLTERE INSFLDNQK
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