| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0646 |
|---|
| Symbol | |
|---|
| ID | 4808175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 798912 |
|---|
| End bp | 801002 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640106060 |
|---|
| Product | anaerobic ribonucleoside triphosphate reductase |
|---|
| Protein accession | YP_001037074 |
|---|
| Protein GI | 125973164 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
|---|
| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.132822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACGA AAATTTCAAA AAGGGATGGA AGAATTGAAA AGTACCAGCC TGAGAAAATA
ACCTGGGCAA TATTTAAAGC TGCAACTGCC TGCGGAGGAA GTGATTTTGG CCGTGCTGAA
GAACTTTGCC GCCAGGTAAA TGAAATACTC AACAAACAGT TTAAAGACAG GATACCTGGA
GTAGAAGATA TCCAGGACAT TGTTGAAAAG GTTTTGATTG AGAACGGTCA TGCCAAAACT
GCAAAGGCGT ACATATTGTA CCGTGAGAAA AGGAAAAGCG CCCGGGATTT GAATGCCTTG
GTGGGAGCCA CTATTAACAT GTTTTCAGAC TACCTGGGGG ACAGGGACTG GCATATTAAG
GAGAATGCCA ATACTCAAAA AAGTGTAAAC GGCCTGAACA ATTATGTGAG AGAGGTTTTT
ACAAAAAAAT ACTGGCTTTA TGAAATTTAT CCCGCTGAAG TAAGAGAAGC GCATGAAAAC
GGAGACTGCC ACATACATGA CCTGGGTTTC TTCGGTCCTT ACTGCGCAGG TTGGGATTTA
CGCCAGTTGC TTTTAGACGG ATTCGGCGGT GTTGAAGGTA AAGTGGAAAG CAGGCCGGCA
AAGCATTTGA GATCATTTTT GGGACAAATT GTAAATTCCA CTTTCACAAC TCAGGGAGAA
ACAGCCGGAG CTCAGGCATG GTCCAGTTTT GATACATATT GTGCGCCGTT TATACGTTAT
GACAACATGA CGTATGAACA GGTAAAACAG TGCCTTCAGG AGTTCGTTTT TAACATAAAT
GTACCCACAA GAGTAGGATT TCAGTGTCCT TTTTCAAATC TTACATTTGA CATAAAGGTA
CCAAACACTT TGAAAGATGA GCCGGTTATT ATCGGCGGAA AATATATGGA TGCAACTTAC
AAAGAATTCC AAAAGGAAAT GGATATGTTT AATACGGCCT TTTGTGATGT AATGTTGGAA
GGCGATGCGA AGGGAAGAGT GTTTACCTTT CCGATACCTA CTATTAATAT CACAAAGGAT
TTTGACTGGG ATAACCCGGT AGTGGATAAA TTTATGAAAA TAACTTGCAA ATACGGCATA
CCGTATTTTG CAAATTATAT AAACTCGGAT TTGTCGCCGG AAGATGCCGT ATCTATGTGC
TGCAGGCTGA GAATTGACAC TACCGAGCTT AGAAAAAGAG GAGGAGGGCT TTTTGGAAGC
AACCCACTGA CCGGGTCCAT TGGAGTTTTT ACAATCAACC TTCCAAGAAT CGGTTATCTT
TCAAAATCTG AAAGTGAATT TAAGGAAAGA CTTTGGAAAA TCGCGAATAT AGGCAAAACA
TCTCTGGAGA TCAAGAGAAA GATAATTGAG CAGCAGTCGG AAAAGGGACT TTATCCGTAT
TCAACCCATT ACTTAAGGCA CGTTAAGCAA AGGACAGGAG AATATTGGTT CAATCACTTC
AATACTATTG GAATTGTTGG AATGAATGAA GCGCTCAAAA ACTTTATGGG AAAAGATATA
ACGACTCCGG AAGGCCAAAA GTTTGCCATT GATATAATGC ATTATTTGAG GGATATTTTG
TTGGAATTCC AGAACGAAAC CGGACATTTT TACAATCTGG AAGCCACTCC TGCGGAAGGA
ACATCTTACA GGCTTGCCAA AATTGACAAG GAAAGATATC CTGACATAAT TACAGCAGGA
CGTGATATCC CATATTATAC AAACTCAACC CAGCTTCCTG TGGATTATAC GGATGATATT
TTTGAGACTT TGGAACTTCA GGACGAACTC CAGTCTCTCT ACACCGGAGG TACGGTTCAG
CATCTTTATC TTGGCGAAAG CATTGAAGAT GTCAATGTGT GCAAGAATCT TATAAGAAAG
GTGTTTACAA ATTACAAAAT GCCCTATATC TCAATTACTC CAACCTTTAG CATCTGCAAG
GACCATGGAT ATATAAAAGG AGAGCATTTC AAATGTCCTG AATGCGGCAA CGATACCGAG
GTATGGTCAA GGGTAACCGG GTATTTAAGA CCGGTGGCAA ATTATAATAT TGGTAAAAAG
GAAGAGTATT TCAACAGGAA GAAATTTAAA CTGGCGGAGA AAGTGTCATG A
|
|---|
| Protein sequence | MVTKISKRDG RIEKYQPEKI TWAIFKAATA CGGSDFGRAE ELCRQVNEIL NKQFKDRIPG
VEDIQDIVEK VLIENGHAKT AKAYILYREK RKSARDLNAL VGATINMFSD YLGDRDWHIK
ENANTQKSVN GLNNYVREVF TKKYWLYEIY PAEVREAHEN GDCHIHDLGF FGPYCAGWDL
RQLLLDGFGG VEGKVESRPA KHLRSFLGQI VNSTFTTQGE TAGAQAWSSF DTYCAPFIRY
DNMTYEQVKQ CLQEFVFNIN VPTRVGFQCP FSNLTFDIKV PNTLKDEPVI IGGKYMDATY
KEFQKEMDMF NTAFCDVMLE GDAKGRVFTF PIPTINITKD FDWDNPVVDK FMKITCKYGI
PYFANYINSD LSPEDAVSMC CRLRIDTTEL RKRGGGLFGS NPLTGSIGVF TINLPRIGYL
SKSESEFKER LWKIANIGKT SLEIKRKIIE QQSEKGLYPY STHYLRHVKQ RTGEYWFNHF
NTIGIVGMNE ALKNFMGKDI TTPEGQKFAI DIMHYLRDIL LEFQNETGHF YNLEATPAEG
TSYRLAKIDK ERYPDIITAG RDIPYYTNST QLPVDYTDDI FETLELQDEL QSLYTGGTVQ
HLYLGESIED VNVCKNLIRK VFTNYKMPYI SITPTFSICK DHGYIKGEHF KCPECGNDTE
VWSRVTGYLR PVANYNIGKK EEYFNRKKFK LAEKVS
|
|---|
| |