Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0617 |
Symbol | |
ID | 4808219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 756695 |
End bp | 757993 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106031 |
Product | recombination factor protein RarA |
Protein accession | YP_001037045 |
Protein GI | 125973135 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.907625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATTA AAAAAGAGCC ACTGGCATAT AGAATGAGAC CCAGGACCCT GGAGGAGTTT TACGGACAGG AAGAAATAGT CGGCGAGGGA AAGCTTTTAA ACAGGATGAT AAAGGCAGAC AGGATTTCAT CGATTATTCT TTACGGTCCG CCCGGAACGG GTAAAACTTC TCTAGCAAGG ATTATTGCCA ACAGTACCAA GGCCAATTTT GAAAAACTTA ATGCTGTCAC TGCCGGTGTT GCGGATATAA AGAGGATTGT GTCGGATACA CAGAATCCGA TATTAAATCC AAAGGGAAGA ACCGTATTGT TTATTGATGA AATTCACAGA TTTAACAAGT CCCAGCAGGA TGCACTTCTT CCGTATGTGG AGGACGGTAC TATTATCCTT GTGGGGGCAA CCACCGAGAA CCCTTTTTTT GAAGTCAACA AGGCGTTGAT TTCAAGGTCT TCGGTATTTA TGCTAAAACC CCTTGGCAGT GACGCAATAA AAAAGATAAT AAGAAATGCC TTAACTGACA AAGAACGGGG TCTGGGCAAT ATGGATATTG AAATAGAAGA GGATGCGCTG AACTTTTTGG CGGATATATG TGACGGTGAT GCCAGAATAG CTTTAAATGC CCTTGAACTT GCAGTTTTGA CTTCCCCTGT CGGAAGTGAC GGTAAATTTC ATATTGATAT ACAACTGATT GAGGAATGCA TCCAAAAAAA AGCTGCAAGG TATGACAAAT CCGGTGAGGA ACATTATGAC AATATCAGTG CTTTTATAAA GTCCATGAGG GGAAGCGATC CGGACGCGGC AGTGTTTTAT CTTGCACGGG CGTTGTATGC CGGAGAAGAT CCGATGTTTC TGGCAAGAAG GATAATGATA TGTGCTGCCG AAGATGTGGG TATGGCAAAC CCAGCTGCTT TGCAGGTGGC AGTTGCAGCT GCGCAGGCTG TGCATATGGT AGGTATGCCG GAGGCCAGAA TAATTTTGTC TCAGGCTGCG ATTATGGTGG CCACCAGTCC AAAATCAAAC TCATGTTATG TGGCAATTGA CCGTGCTTTG GATGATGTGA AAAACAAAAG AACAGGAGAA GTCCCGATGC ACCTTAGAAA TGCGGTGACA TCGGGAATGA AAGAATTAGG ATACGGAAAG GGTTATAAAT ATGCCCATGA TTATCCCGGC AATATCGTTG ACCAGGATTA CCTTCCGCAA GAGATTAAGG GGACTGTTTA CTATAATCCC AGCGCAAATG GTTATGAATT AAAAATTAAG GAATGGCTTG AAAAAAGAAG AAACAAGAGG GAAATATAA
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Protein sequence | MDIKKEPLAY RMRPRTLEEF YGQEEIVGEG KLLNRMIKAD RISSIILYGP PGTGKTSLAR IIANSTKANF EKLNAVTAGV ADIKRIVSDT QNPILNPKGR TVLFIDEIHR FNKSQQDALL PYVEDGTIIL VGATTENPFF EVNKALISRS SVFMLKPLGS DAIKKIIRNA LTDKERGLGN MDIEIEEDAL NFLADICDGD ARIALNALEL AVLTSPVGSD GKFHIDIQLI EECIQKKAAR YDKSGEEHYD NISAFIKSMR GSDPDAAVFY LARALYAGED PMFLARRIMI CAAEDVGMAN PAALQVAVAA AQAVHMVGMP EARIILSQAA IMVATSPKSN SCYVAIDRAL DDVKNKRTGE VPMHLRNAVT SGMKELGYGK GYKYAHDYPG NIVDQDYLPQ EIKGTVYYNP SANGYELKIK EWLEKRRNKR EI
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