Gene Cthe_0617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0617 
Symbol 
ID4808219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp756695 
End bp757993 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content43% 
IMG OID640106031 
Productrecombination factor protein RarA 
Protein accessionYP_001037045 
Protein GI125973135 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.907625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTA AAAAAGAGCC ACTGGCATAT AGAATGAGAC CCAGGACCCT GGAGGAGTTT 
TACGGACAGG AAGAAATAGT CGGCGAGGGA AAGCTTTTAA ACAGGATGAT AAAGGCAGAC
AGGATTTCAT CGATTATTCT TTACGGTCCG CCCGGAACGG GTAAAACTTC TCTAGCAAGG
ATTATTGCCA ACAGTACCAA GGCCAATTTT GAAAAACTTA ATGCTGTCAC TGCCGGTGTT
GCGGATATAA AGAGGATTGT GTCGGATACA CAGAATCCGA TATTAAATCC AAAGGGAAGA
ACCGTATTGT TTATTGATGA AATTCACAGA TTTAACAAGT CCCAGCAGGA TGCACTTCTT
CCGTATGTGG AGGACGGTAC TATTATCCTT GTGGGGGCAA CCACCGAGAA CCCTTTTTTT
GAAGTCAACA AGGCGTTGAT TTCAAGGTCT TCGGTATTTA TGCTAAAACC CCTTGGCAGT
GACGCAATAA AAAAGATAAT AAGAAATGCC TTAACTGACA AAGAACGGGG TCTGGGCAAT
ATGGATATTG AAATAGAAGA GGATGCGCTG AACTTTTTGG CGGATATATG TGACGGTGAT
GCCAGAATAG CTTTAAATGC CCTTGAACTT GCAGTTTTGA CTTCCCCTGT CGGAAGTGAC
GGTAAATTTC ATATTGATAT ACAACTGATT GAGGAATGCA TCCAAAAAAA AGCTGCAAGG
TATGACAAAT CCGGTGAGGA ACATTATGAC AATATCAGTG CTTTTATAAA GTCCATGAGG
GGAAGCGATC CGGACGCGGC AGTGTTTTAT CTTGCACGGG CGTTGTATGC CGGAGAAGAT
CCGATGTTTC TGGCAAGAAG GATAATGATA TGTGCTGCCG AAGATGTGGG TATGGCAAAC
CCAGCTGCTT TGCAGGTGGC AGTTGCAGCT GCGCAGGCTG TGCATATGGT AGGTATGCCG
GAGGCCAGAA TAATTTTGTC TCAGGCTGCG ATTATGGTGG CCACCAGTCC AAAATCAAAC
TCATGTTATG TGGCAATTGA CCGTGCTTTG GATGATGTGA AAAACAAAAG AACAGGAGAA
GTCCCGATGC ACCTTAGAAA TGCGGTGACA TCGGGAATGA AAGAATTAGG ATACGGAAAG
GGTTATAAAT ATGCCCATGA TTATCCCGGC AATATCGTTG ACCAGGATTA CCTTCCGCAA
GAGATTAAGG GGACTGTTTA CTATAATCCC AGCGCAAATG GTTATGAATT AAAAATTAAG
GAATGGCTTG AAAAAAGAAG AAACAAGAGG GAAATATAA
 
Protein sequence
MDIKKEPLAY RMRPRTLEEF YGQEEIVGEG KLLNRMIKAD RISSIILYGP PGTGKTSLAR 
IIANSTKANF EKLNAVTAGV ADIKRIVSDT QNPILNPKGR TVLFIDEIHR FNKSQQDALL
PYVEDGTIIL VGATTENPFF EVNKALISRS SVFMLKPLGS DAIKKIIRNA LTDKERGLGN
MDIEIEEDAL NFLADICDGD ARIALNALEL AVLTSPVGSD GKFHIDIQLI EECIQKKAAR
YDKSGEEHYD NISAFIKSMR GSDPDAAVFY LARALYAGED PMFLARRIMI CAAEDVGMAN
PAALQVAVAA AQAVHMVGMP EARIILSQAA IMVATSPKSN SCYVAIDRAL DDVKNKRTGE
VPMHLRNAVT SGMKELGYGK GYKYAHDYPG NIVDQDYLPQ EIKGTVYYNP SANGYELKIK
EWLEKRRNKR EI