Gene Cthe_0613 details

Gene Information

• Locus tag: Cthe_0613
• ID: 4808215
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 752381
• End bp: 754186
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640106027
• Product: thiamine pyrophosphate enzyme-like TPP-binding
• Protein accession: YP_001037041
• Protein GI: 125973131
• COG category: [C] Energy production and conversion
• COG ID: [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
• TIGRFAM ID: [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0102763
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAAT TATGTGATAA GATAGAAATA ATATTATTCC ATTATTTATG GTTAGATGGG 
GGATTGTTGA TGAAAAAACT AATGCTCGGA AACGAGGCGG TAGCCAGAGG AGCTTATGAA 
GCAGGAGTCA GAGTGGCAAC GGCTTACCCT GGAACGCCAA GTACCGAAAT AACGGAAAGT 
ATAGCAAAAT ACGACGAAGT GTATTGTGAA TGGTCACCGA ATGAAAAAGT TGCTCTGGAA 
GTAGCTATAG GCTCGGCAAT TGCCGGTGGA AGAGCAATTT GTTCGATGAA GCATGTCGGA 
CTTAATGTGG CGGCCGATCC TTTGTTCACC GTATCCTACA CCGGAGTTAA TGCAGGACTG 
GTTATCATGG TTGCGGATGA TCCGGGAATG CATAGCTCTC AAAACGAACA GGACAGCAGA 
ATGTATGCAA AAGCTGCAAA AGTGCCCATG GTTGAGCCTG CCGACAGTAG AGAGTGTAAA 
GAATATGTGA AGGCGGCTTT TGAAATAAGC GAAAAATTTG ATACTCCGGT TATTTTCAGA 
CTTTCGACTA GGATATCCCA TTCACAGAGT GTTGTTGAAA TCGGTGAAAG AGAGGATGTA 
CCGCTTAAGG AATACAAAAA GGATCCCGAA AAATATGTCA TGATGCCTGC AATGGCGCGT 
AAAAGACATG TTGCGGTAGA AAGCAGAATG GCTGCTTTGG CCGAGTTCTC CAATACAACT 
CCTCTAAACA GGATTGAATG GGGAAGCACG GATATCGGTG TAATAACCAG CGGAATTGCC 
TACCAGTATG CAAGAGAAGC CTTCGGTGAT GTCTCATATC TCAAGCTCGG AATGATTTAT 
CCACTTCCGG ACAAGTTAAT TAAAGAGTTT TCCGAAAAAG TAAAAGTATT ATATGTTATA 
GAGGAACTGG AACCGTTTTT TGAAGAGCAT ATAAGAAAAC TGGGAATCAA GGTTATAGGC 
AAGGATTTAC TGCCCGTTAC AGGGGAATAC AGTGCCAACC TTATCAGGGA AAAAGTATTT 
GGAAAACAAA TCGGCGGAAA GAAAATTGAG GGAGTCCAGG TTCCGGTCAG ACCTCCTGTA 
ATGTGTCCGG GATGCCCGCA CAGGGGAATG TTTTATGTGT TAAACAAACT GAAACTTACC 
GTAAGCGGAG ACATCGGATG TTACACATTG GGAGCGTTGC CGCCCACCCA GGCGATGGAC 
ACTTGTATCT GTATGGGTGC AAGTATCGGT GCGGCTCACG GTATGGAAAA AGCAAGGGGC 
AGAGAGTTTA GAACAAAAAC TGTTGCCATA CTGGGAGATT CCACATTTGT GCATTCGGGA 
ATAACCGGAC TTATTGACGT GGTTTACAAT AAAGGAAATT CCACGGTGAT AATACTGGAC 
AACTCCATTA CCGGTATGAC AGGTCATCAG CACAATCCTA CAACCGGTTT TACAATAAAG 
GGAGAACCCA CAAAACAGGT GGATCTTGTA AAGCTTTGCA ATGCCGTTGG AATTGACAGG 
GTCAAGGTTG TAGATCCTTT TAATATAAAA GAGTTTGAAA AAACCGTAAA AGAAGAAATT 
GAAGCTGATG AGCCTTCGGT CATAATTTCC CAAAGACCGT GTGCCCTTTT AAAACATGTA 
AAATTTGAAG GCCCGCACAG GATAGTCATT GAAAAGTGCA GAAAATGCAA GATGTGTATG 
AGAATAGGAT GTCCTGCCAT TGTTGACATG GGGGACCATA TAGAAATAAA TGATGCTTTG 
TGTGTGGGTT GCGGGCTGTG TTCAAAAGTA TGTAATTTCG ATGCGATTGA AAAGGCTGGT 
GAATAA 

 

Protein sequence

MLELCDKIEI ILFHYLWLDG GLLMKKLMLG NEAVARGAYE AGVRVATAYP GTPSTEITES 
IAKYDEVYCE WSPNEKVALE VAIGSAIAGG RAICSMKHVG LNVAADPLFT VSYTGVNAGL 
VIMVADDPGM HSSQNEQDSR MYAKAAKVPM VEPADSRECK EYVKAAFEIS EKFDTPVIFR 
LSTRISHSQS VVEIGEREDV PLKEYKKDPE KYVMMPAMAR KRHVAVESRM AALAEFSNTT 
PLNRIEWGST DIGVITSGIA YQYAREAFGD VSYLKLGMIY PLPDKLIKEF SEKVKVLYVI 
EELEPFFEEH IRKLGIKVIG KDLLPVTGEY SANLIREKVF GKQIGGKKIE GVQVPVRPPV 
MCPGCPHRGM FYVLNKLKLT VSGDIGCYTL GALPPTQAMD TCICMGASIG AAHGMEKARG 
REFRTKTVAI LGDSTFVHSG ITGLIDVVYN KGNSTVIILD NSITGMTGHQ HNPTTGFTIK 
GEPTKQVDLV KLCNAVGIDR VKVVDPFNIK EFEKTVKEEI EADEPSVIIS QRPCALLKHV 
KFEGPHRIVI EKCRKCKMCM RIGCPAIVDM GDHIEINDAL CVGCGLCSKV CNFDAIEKAG 
E