| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0612 |
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| Symbol | |
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| ID | 4808214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 750623 |
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| End bp | 752134 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106026 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_001037040 |
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| Protein GI | 125973130 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000214976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATGA AATTCTTGTT TCTTGCTCTC TTCGTTGCCG TTATGATCGG CGTCGGAATT
TACAGCCGGA AAAAAATAAA TAACGAACAG GACTTTTTAT TGGGTGGAAG AAAAATGGGA
CCGTGGATTT CGGCTTTTGC CTATGGTACA ACATATTTTT CAGCGGTTAT TTTCATAGGC
TATGCCGGAA AAAACGGATG GAATTTTGGA ATTTCTGCCG TTTGGATTGG AATCGCAAAT
GCAGTTTTAG GTTGTCTTCT CTCCTGGCTT GTCCTTGCAA AGAGAACCCG TAAGATGACG
CATGATTTAA ACGTCTCAAC AATGCCCGAT TTCTTTGAAA AAAGATATGA CAGCAAGGGT
TTGAAAATAG TTTCGTCAAT CATTATCTTC GTATTCCTTG TTCCTTATTC GGCATCGGTT
TACCAGGGAT TGAGCTATTT AATTGAAAAA ACAATTGCAG AGCCTTTGGG TGCAACTTTT
GGAATTACGA TTTCTTTTGA GGCAATTATG CTGATAATGG CAGCCTTGAC GGGAATATAT
CTTTTGCTTG GAGGATATGT TGCCACTGCA ATTAATGATT TAATACAGGG CATTATAATG
ATACTCGGAA TTATTTTAAT GGTAGCCTTT GTTGTAAATC ACGAAAATGT AGGAGGAATT
GCCGAAGGAC TGTCGAGGCT TTCACAAATT CCGGACGTGG GAGAAGGGCT GGTCAAGCCT
TTCGGACCGC AGCCTTTAAG CCTTCTTTCT TTGGTTATAC TTACGAGCCT TGGCACTTGG
GGATTACCTC AGATGATTCA TAAATTTTAT GCGGTAAAAG ACGATGATTC CATAAAGAAG
GCTACTATTG TTTCGACGAT TTTCGCAACA TTGATATCCG GCGGAGCTTA TTTCATAGGT
GTCTTTGGGA GGCTCTTTGT TACACTGGAT GAAATAGGCG GAGATCTTGA CAGGATTGTA
CCTACCATGC TTGAAAAGGC ATTGCCGGAT TATTTGATGG GTATTGTAAT TATTCTGGTG
CTTTCGGCTT CGATGTCAAC TCTTTCTTCA CTGGTGCTTG TATCAAGTTC GGCAATTTCC
ATGGACCTTG TAAAGGGAGT ATTTTTCCCG AAGATGAAGA GTGAAAAGGT CATGGTTCTT
ATGAGAATAC TTTGTGCTTT GTTTGTGGCA TTTTCCTTCG TCGTCGGTGT AAGACCCAGC
TCCATTTTGA CACTTATGTC ATTGTCCTGG GGAACTGTTG CAGGTTCATT CCTTGCTCCT
TTCTTGTACG GCCTGTACTG GAAAGGTACT ACAAAGGCGG GAGCGTGGAC GGGTATGATA
GTTGGGTTCT TATGCTCCGT GGGAGGTTCA ATGATTTTTG GTTTAAAGAA TGCACCGAAT
GTGGGAGCGG CAGCCATGCT CATATCTCTT ATAGTGGTAC CTGTGGTAAG CCTCTTTACG
GCAAAGCTTC CAAATGCGCA TATTAACATG ATATACGGTG AGGAAGACAG TAAGCAGAAA
TTGGCCTCAT AA
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| Protein sequence | MFMKFLFLAL FVAVMIGVGI YSRKKINNEQ DFLLGGRKMG PWISAFAYGT TYFSAVIFIG
YAGKNGWNFG ISAVWIGIAN AVLGCLLSWL VLAKRTRKMT HDLNVSTMPD FFEKRYDSKG
LKIVSSIIIF VFLVPYSASV YQGLSYLIEK TIAEPLGATF GITISFEAIM LIMAALTGIY
LLLGGYVATA INDLIQGIIM ILGIILMVAF VVNHENVGGI AEGLSRLSQI PDVGEGLVKP
FGPQPLSLLS LVILTSLGTW GLPQMIHKFY AVKDDDSIKK ATIVSTIFAT LISGGAYFIG
VFGRLFVTLD EIGGDLDRIV PTMLEKALPD YLMGIVIILV LSASMSTLSS LVLVSSSAIS
MDLVKGVFFP KMKSEKVMVL MRILCALFVA FSFVVGVRPS SILTLMSLSW GTVAGSFLAP
FLYGLYWKGT TKAGAWTGMI VGFLCSVGGS MIFGLKNAPN VGAAAMLISL IVVPVVSLFT
AKLPNAHINM IYGEEDSKQK LAS
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