| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0593 |
|---|
| Symbol | |
|---|
| ID | 4808195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 728648 |
|---|
| End bp | 729646 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640106007 |
|---|
| Product | copper amine oxidase-like protein |
|---|
| Protein accession | YP_001037021 |
|---|
| Protein GI | 125973111 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGCTC TTATCTTGGG TTTTGCATGC AACATATCGT TTGCTTCAAC ACCAATGCAG
CGCGAACTTA AGGTATATGT CGATGACAGA GAAGTGAAAT TTCCGGATGC AAAGCCTTAC
ATAAGTGAAG CTGGAAGAAC AATGGTTCCG ATTAGTGCAG TTGCAGAGAG CTTTGGAGCA
AAGGTTGATT GGGATGCCGT CTTGAGAAAG GTTACAATTA CTTATGATGA CATAGAAATA
GAATTTTTGC CGGATTATGT CGAGGATGTA ATGCTTGTTA GAAGTATAGA AAAGAACCAA
AGAAAAACCG TTCAATTAGA CTCTAAACCT GTTATCAGAA ACGATCGGAC ATATTTGCCT
TATCGTGCTA TCAGTGAAGC GTTTGGCTAT AAAGTTTACT GGGATGAAAA AGAATATAAG
GTTATTGTAG ATACTAAAGA CAGGCAACCC GTATTTTATA TAAACCCCGG CTTAAGTGAT
AACGATTATG AGTGTATCGC AAATTACAAT ACAGATTTTG ATAATCTTGC ACAAGTTTTA
AAACGCACTG ATGTTGAAAT TCAACTTACT GATGAAATGA GAGAAAGCTA TTTATATCGG
GCAAAAAATT ATATTGAAAA TATAATTGGA AATGTTGATT ACAGTAAAGA ATTCGAGCCG
GAATTTCCCA CCGCTCCGTT TACACCGGTT ATGGAAGAAG TATATAATGA TGCTGTCAAA
AACTCTATAA TACGGGAAGT AAAATTCATT GCAGACCCTT CCGATATTGA AGTTCTTATG
ATACATCCGA TCGAAAACAG ACCGTATAAG GTAATGGTTT TGGGCAGATT GGAATTCATA
TATCATGAAG CGTCCGATGA ATATCTTGAA AAGTTTGGAG GCAAGTTGAA AAAGGGTGTC
CGGTACAGTA CAAAAATAGC TGTAACATTT GAGTTGAAAC CGAATGATGC GGGTCTTGGA
CATGCTATTT TAGACAATAC ATTTGAAGAA ATAGAATAA
|
|---|
| Protein sequence | MFALILGFAC NISFASTPMQ RELKVYVDDR EVKFPDAKPY ISEAGRTMVP ISAVAESFGA
KVDWDAVLRK VTITYDDIEI EFLPDYVEDV MLVRSIEKNQ RKTVQLDSKP VIRNDRTYLP
YRAISEAFGY KVYWDEKEYK VIVDTKDRQP VFYINPGLSD NDYECIANYN TDFDNLAQVL
KRTDVEIQLT DEMRESYLYR AKNYIENIIG NVDYSKEFEP EFPTAPFTPV MEEVYNDAVK
NSIIREVKFI ADPSDIEVLM IHPIENRPYK VMVLGRLEFI YHEASDEYLE KFGGKLKKGV
RYSTKIAVTF ELKPNDAGLG HAILDNTFEE IE
|
|---|
| |