Gene Cthe_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0583 
Symbol 
ID4808258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp714453 
End bp715637 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content39% 
IMG OID640105997 
Productresponse regulator receiver protein 
Protein accessionYP_001037012 
Protein GI125973102 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGA TTCTTGTAAT AGACGATGAA AGTACCATTC TTCAGAACAT TAAATTTCTT 
CTGGAAATTG ACGGCAATGA AGTACTGACG GCTTCCAGCA GTACAGAAGG ACTCAGGATT
TTTACAGAAA ACTGCAACTC CATCGATGTT GTCATTACCG ACATGAAAAT GCCAAAGCTG
TCCGGCATGG ACATTCTAAG AGAAATTAAA AAAATCACGC CTCATATGGC CGTAATCATC
CTTACGGGGC ACGGTGACTT GGACAATGCA ATTCTTGCAA TGAAAGAAGG AGCTTTTGAA
TATCTCAGAA AACCGGTCAC AGCCCAGGAT TTATCAATAG CTATAAATAA CGCCATAAAC
AGAAAGAAAC TTCTCATGGA AAATGAAAGA ATGACCCAGG AATTGCTGGC TCACAGAAAC
TATTTACAAG GTCTTCATGA TTCTGCGGCA AAAATACTGC TCAACATGCT GCCAAAAAAC
CTGCCGGATA TAGAGGGCTT CAACTTTGCC GTGGACTACA AAAGCTGTGA CGGTGTCGGC
GGTGACATGT ACGATGTGTG TGATATAGGA GATTATATAT GTTTTTATGT TTTTGACGTA
TCCCATCATG GCATTCTTGC CGCCGTTATT TCAATAATAA TAAAAAGTTT TCTTCAAAAT
ATAGAATACA ACTATCGTCA GGGAATCAAC AAGAGAAGAT TTCCTGAAAT AGTTTTGGAT
TTGAATCTGG AACTTCTGTC CAATACGGCG CAAAATGTGT TTGCCTCCTT GTTTTTAGGC
TTTATTGATA AAAACAGCAA AAAGCTCTAT ACTGTATCGG CCGGCCATAT TCCACAGTAC
ATAATGAAAG AAAACGGATT GGTGCCGTTG GAATCAACAG GACCTATTCT TGGAGTCTTT
GAAGATTCAA CCTACAAATG TGCTGTAAAC CAGTTGGAAC CCGGAGACAA AGTATTGCTT
TTCACAGACG GCATTATTGA AAGTCCTTCG GATTCAAGTG ATGAAAGTTC TGACGGCAAT
CAAATTTTCG GCTATGAAAA CATGGTTAAA GTTCTCGAAA GCTGCAAAAA TGAACCTATT
TCAACTACCA TTGATAAAAT AATGAAAGCC GTAAAAGATT TCTCGGGCAA TAGGTGTACT
GATGACATGA CGATATTAGG TGTTGAAGTC TTAAAAGAGA ATTGA
 
Protein sequence
MAKILVIDDE STILQNIKFL LEIDGNEVLT ASSSTEGLRI FTENCNSIDV VITDMKMPKL 
SGMDILREIK KITPHMAVII LTGHGDLDNA ILAMKEGAFE YLRKPVTAQD LSIAINNAIN
RKKLLMENER MTQELLAHRN YLQGLHDSAA KILLNMLPKN LPDIEGFNFA VDYKSCDGVG
GDMYDVCDIG DYICFYVFDV SHHGILAAVI SIIIKSFLQN IEYNYRQGIN KRRFPEIVLD
LNLELLSNTA QNVFASLFLG FIDKNSKKLY TVSAGHIPQY IMKENGLVPL ESTGPILGVF
EDSTYKCAVN QLEPGDKVLL FTDGIIESPS DSSDESSDGN QIFGYENMVK VLESCKNEPI
STTIDKIMKA VKDFSGNRCT DDMTILGVEV LKEN