Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0580 |
Symbol | |
ID | 4808255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 709432 |
End bp | 710625 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105994 |
Product | aspartate aminotransferase |
Protein accession | YP_001037009 |
Protein GI | 125973099 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAG AAAGTGTTGT AAACAGTTTA AAGAAAGCCT CCTGGATAAG GGCAATGTTT GAAGAGGGAG AAAAACTTCG TAAAATTCAC GGGGCCGACA ACGTTTATGA TTTTACTTTG GGAAATCCCG ACCACGAACC GCCCTCTTCG GTAAAAGAAA CACTTAAAAA AATTGTTACC GAAGACAAAC CGGGCATACA CCGTTATATG AATAACGCAG GATATGAAGA TGTGAGACAA AAAGTGGCAG ACTATCTGAA CAGAACCTCC GGGCTGTCTT CCATATCATC TCAGCATATA ATCATGACCT GCGGCGCTGC CGGTGCTCTC AACGTTGTAC TGAAAACTCT TCTCAACCCC GGAGAAGAAG TCATCATACT GGCACCTTAC TTTGCAGAGT ATATATTCTA TGTGGGAAAT CACGGCGGAA AAGTGGTTAT AGTACCACCG GAAAAGGACA GTTTTAAACC TGACTTAAAA ATACTTGAAA ACAGCATCAC CGAAAAAACT AAAGCCATAA TCATAAATTC TCCCAATAAT CCATCGGGTT ACATATACAG CGAAGAAACC CTGAAGGAGA TTTTTGAAGT TCTTGAAAAG AAAGAAAAGG AATATAATTC CAGTATATAT GCAATTTCCG ATGAACCTTA CTACAAGCTG GTTTACGACA ATGTAAAACT TCCTTTTCTT TTCAGACTGT ATAAAAAATC CTTTATCGTA AACTCTTTCA GCAAATCCCT GGCTCTTGCG GGGGAAAGAA TCGGTTATAT TGCGGTAAAT CCGGAGATTC CCGAACTGGA ACTTATATTG GAAAGCTTGA TATTCTGCAA CCGTACCTTA GGTTACGTCA ATGCTCCTGC ATTGTTCCAA AAGGCAATTG CCGACTCTCT GGATGCGGAT ATTGATGTTG AAAGCTATAA ACAAAGGCGG GATTTAATAT ATGACACTTT AACCCGTCTG GGCTTTTCAT GCATAAAGCC CCAGGGAACT TTCTACATTT TCCCCAAATC CCCTATTGAA GATGATATAC AATTTATCAA ACATGCGGTT AAATACAACA TTCTTTTGGT TCCGGGCACC GGCTTTGGTT TACCGGGGCA CTTCAGACTC TCCTACTGCG TAAGCATGGA TATCATAAAA AAATCACTGC CGGCTTTCGA AGCATTGGCC AAAGACTTTA ATCTTATAAA ATAA
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Protein sequence | MISESVVNSL KKASWIRAMF EEGEKLRKIH GADNVYDFTL GNPDHEPPSS VKETLKKIVT EDKPGIHRYM NNAGYEDVRQ KVADYLNRTS GLSSISSQHI IMTCGAAGAL NVVLKTLLNP GEEVIILAPY FAEYIFYVGN HGGKVVIVPP EKDSFKPDLK ILENSITEKT KAIIINSPNN PSGYIYSEET LKEIFEVLEK KEKEYNSSIY AISDEPYYKL VYDNVKLPFL FRLYKKSFIV NSFSKSLALA GERIGYIAVN PEIPELELIL ESLIFCNRTL GYVNAPALFQ KAIADSLDAD IDVESYKQRR DLIYDTLTRL GFSCIKPQGT FYIFPKSPIE DDIQFIKHAV KYNILLVPGT GFGLPGHFRL SYCVSMDIIK KSLPAFEALA KDFNLIK
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