| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0578 |
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| Symbol | |
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| ID | 4808253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 706080 |
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| End bp | 708290 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640105992 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001037007 |
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| Protein GI | 125973097 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAC TCATTATCAC TGTTATAGTA TCTGCTGTCC TTTTAACTGC TCTTATACCG
CAGTTGCCTG TTTTTGCAGC AGACTATAAC TATGGAGAAG CACTCCAAAA AGCAATTATG
TTCTATGAAT TTCAAATGTC CGGAAAGCTT CCCGACAACA TCCGTAACAA CTGGCGCGGT
GATTCATGTC TCGGAGACGG AAGCGATGTA GGTCTTGACC TCACAGGAGG TTGGTTTGAC
GCCGGTGACC ATGTAAAATT CAATCTGCCT ATGGCTTACA CAGCCACTAT GCTTGCATGG
GCTGTGTATG AGTACAAGGA CGCGTTACAA AAAAGCGGTC AATTGGGCTA TTTAATGGAT
CAGATTAAAT GGGCATCGGA CTACTTCATA AGATGCCATC CCGAAAAATA TGTATATTAT
TATCAAGTGG GTAACGGTGA CATGGACCAC AGATGGTGGG TGCCGGCAGA ATGTATAGAT
GTTCAGGCAC CAAGACCGTC TTACAAAGTA GATCTGTCAA ATCCCGGTTC CACAGTTACT
GCGGGTACAG CTGCCGCACT TGCTGCAACT GCCTTGGTAT TCAAAGACAC TGATCCGGCA
TATGCCGCTC TGTGCATACG TCATGCAAAA GAACTCTTTG ATTTTGCTGA AACCACTATG
AGTGATAAAG GATATACCGC AGCATTGAAT TTCTACACAT CTCACAGTGG ATGGTATGAC
GAGCTTTCCT GGGCAGGTGC ATGGATTTAT CTTGCAGACG GTGACGAAAC TTATCTTGAA
AAAGCTGAAA AGTATGTGGA TAAATGGCCA ATCGAAAGCC AGACAACTTA CATTGCTTAT
TCATGGGGTC ACTGCTGGGA CGACGTTCAC TACGGAGCAG CACTTCTTTT GGCAAAGATT
ACAAACAAAT CCTTATACAA AGAAGCGATA GAAAGACACC TGGACTATTG GACAGTTGGA
TTTAATGGTC AGAGAGTCAG ATATACACCA AAGGGTCTTG CTCACCTCAC TGACTGGGGT
GTATTAAGAC ATGCCACTAC TACTGCATTC CTTGCATGTG TTTATTCCGA CTGGTCAGAA
TGTCCAAGGG AAAAAGCCAA TATTTACATA GATTTTGCCA AGAAACAGGC TGACTATGCC
TTAGGCAGCA GCGGCAGAAG TTATGTAGTC GGATTTGGTG TAAATCCTCC GCAGCATCCG
CACCACAGAA CTGCCCACAG CTCATGGTGT GACAGTCAAA AAGTTCCTGA ATACCACAGA
CACGTTCTTT ACGGAGCACT CGTAGGCGGA CCTGATGCCA GCGATGCTTA TGTTGATGAT
ATAGGAAACT ATGTAACAAA TGAGGTTGCC TGCGACTACA ATGCCGGTTT TGTAGGATTG
CTCGCCAAGA TGTATGAAAA ATATGGCGGA AACCCCATAC CAAACTTCAT GGCTATAGAA
GAAAAAACAA ATGAAGAAAT TTATGTTGAA GCTACCGCCA ATTCAAATAA CGGTGTCGAA
TTGAAAACAT ACCTTTACAA TAAATCCGGA TGGCCGGCAA GAGTTTGCGA CAAGCTTTCC
TTCAGATATT TCATGGACCT TACGGAATAT GTATCCGCCG GATACAATCC TAATGATATA
ACTGTTTCTA TAATTTACAG TGCAGCACCA ACTGCAAAAA TTTCAAAACC AATACTTTAT
GACGCATCCA AAAACATATA TTATTGCGAA ATCGATCTCT CCGGTACCAA GATATTCCCC
GGAAGCAACT CAGACCACCA GAAAGAAACC CAATTTAGAA TACAGCCTCC TGCAGGCGCA
CCTTGGGACA ACACCAACGA CTTCTCCTAT CAGGGAATCA AGAAAAACGG TGAAGTTGTA
AAAGAAATGC CTGTTTATGA AGACGGAATT CTCATATTCG GTGTAGAACC CAATGGTACC
GGTCCTGCAA CACCAACGCC GAAACCGTCC GTAAATCCTT CACCTTCACC TACGCCAACA
TCGGATATTC TTTACGGTGA CATCAATCTG GACGGAAAAA TTAACTCTTC AGATGTTACA
CTGTTAAAAA GATATATTGT GAAGTCCATA GATGTTTTCC CAACCGCTGA TCCGGAACGG
AGCTTAATAG CATCAGATGT AAACGGAGAC GGAAGGGTAA ACTCTACAGA CTATTCATAC
CTTAAACGTT ATGTCTTGAA AATCATACCA ACCATACCCG GAAATTCATG A
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| Protein sequence | MKKLIITVIV SAVLLTALIP QLPVFAADYN YGEALQKAIM FYEFQMSGKL PDNIRNNWRG
DSCLGDGSDV GLDLTGGWFD AGDHVKFNLP MAYTATMLAW AVYEYKDALQ KSGQLGYLMD
QIKWASDYFI RCHPEKYVYY YQVGNGDMDH RWWVPAECID VQAPRPSYKV DLSNPGSTVT
AGTAAALAAT ALVFKDTDPA YAALCIRHAK ELFDFAETTM SDKGYTAALN FYTSHSGWYD
ELSWAGAWIY LADGDETYLE KAEKYVDKWP IESQTTYIAY SWGHCWDDVH YGAALLLAKI
TNKSLYKEAI ERHLDYWTVG FNGQRVRYTP KGLAHLTDWG VLRHATTTAF LACVYSDWSE
CPREKANIYI DFAKKQADYA LGSSGRSYVV GFGVNPPQHP HHRTAHSSWC DSQKVPEYHR
HVLYGALVGG PDASDAYVDD IGNYVTNEVA CDYNAGFVGL LAKMYEKYGG NPIPNFMAIE
EKTNEEIYVE ATANSNNGVE LKTYLYNKSG WPARVCDKLS FRYFMDLTEY VSAGYNPNDI
TVSIIYSAAP TAKISKPILY DASKNIYYCE IDLSGTKIFP GSNSDHQKET QFRIQPPAGA
PWDNTNDFSY QGIKKNGEVV KEMPVYEDGI LIFGVEPNGT GPATPTPKPS VNPSPSPTPT
SDILYGDINL DGKINSSDVT LLKRYIVKSI DVFPTADPER SLIASDVNGD GRVNSTDYSY
LKRYVLKIIP TIPGNS
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