| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0566 |
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| Symbol | |
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| ID | 4808241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 692718 |
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| End bp | 695165 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640105980 |
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| Product | replication restart DNA helicase PriA |
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| Protein accession | YP_001036995 |
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| Protein GI | 125973085 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00911754 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATA TTGCTTCAAT TGCCATCAGC AATACCACAA GGAAATTTGA CAAGGATTAT
CACTATATAA TTCCTGATAA ATATATAGGC AGTATAGTAC CGGGTATGAG GGTGATTGTG
CCCTTCGGCA AGTCAAACCG GCTGGTGGAA GGTTATGTCC TGGATGTGCT GGAAAGCCCT
GAAGTTTCTT CGTTGAAGGA GATAAGCAGG GTTATAGATG AAAAGCCGGT TTTGAAAGAA
AATATGATAA GACTGGCATG CTGGATGAAA AGACAGTATA TTTGCACTTA TTATGATACA
ATAAAATGCA TGCTTCCACC GGGAACAGGA GTAAGCAGTA CAAAAGTTGT AAGGCTCAAA
AAGTGTGAAG GCGGCTTTAA GGGAAATATT AAAAAGATAA TTGATGTTTT GGCTGAGTGT
GGCGGTGAAA TGGAATATGA AGAATTAAAA AAGCAGGTAA ATACCAAAAC CTTTGCAAAA
TACATTAATA ATCTGAAGGA GCAAGGTTGT ATTGAGGTGC ATGAAGAGTT TACTTCCAAA
GTAAAGGAAA AATACGTTCG GGCGGTGTAC CTTGCGAAGC CTTGGGAAGA AGTGGTTTAT
GATATTGAAA CAAACAAGAT TAAGAATATT AAGCATATAA GAATACTTGA ACTGCTCGCT
GAAAATGAGT ACATTCCGGT GGGCGATATT GTGCGCTTTG TCGGTGTGTC GGCAGGCGTT
CTGGATACTT TAAAAAAGAA GGGATATTTG GAGTTTGAAG ATATTGAAGT TACAAGGGAC
CCTGCAGCCA ACATGCCCTA TGAAAGAACA CTTCCAATGA AACCTACGCA GGAGCAGCAG
GTTGTAATAG ACAGAGTTAA AAGCATGCTG GATTCGGGAG AGTTTAACGA AGTTTTGCTG
CATGGAATCA CAGGAAGCGG AAAAACGGAA GTTTATCTTC AATTGATAGG ACACTGCATT
AGTATGGGAA AGCAGGCTAT TGTCCTGGTT CCTGAGATAT CATTAACTCC GCAAATGGTG
AACAGGTTTA AAGGAAGATT TGGTGAGGAT GTGGCTGTAA TGCACAGCCG ATTGTCCCTG
GGTGAAAGAT ATGACCAGTG GAGGCTTGTA AGAGATGGCA GAACCAAGGT TGTGGTCGGA
GCAAGGTCGG CAGTGTTTGC ACCTTTTGAT AATCTTGGAT TGGTGATTAT AGATGAGGAG
CATGAAAGCT CCTATAAATC GGAAATTGTT CCCAAATACC ATGCGGCTGA AATTGCAAGG
CAGCGATGCA TCATGGAAAA TGCGGTGCTG TTGTATGGTT CCGCCACACC TTCGGTGGAG
ACTTATTACA GGGCAAAGAC GGGAGAAATT GAGCTTTTGG AGATGACCAA AAGAGCCAAC
AACATGCTTC TTCCCGAAGT AAAAGTCGTT GACATGAGGA ATGAACTGAA TGCCGGAAAC
AGGTCTGTGT TCAGCCGATG TCTTCAAAAT GAAATCAGAA AAAATATTGA CAGCGGACAG
CAAACAATCG TTTTCCTCAA CAGAAGAGGC TATGCGACGT TTATACTTTG CAGAAACTGT
GGCTATGTTT TAAAATGCCC TTATTGCGAT GTTTCGCTGA CGTACCATTC CCATGAGGAG
CGGGTTATAT GCCATTACTG CGGCTTTACA GTAAAGAACC CGGAGCATTG TCCGAAATGT
AAAAGCAATC ATATAAGGAA CTTCGGCACG GGTACTCAGA AGATCGAGGA AGAAGTAAAA
AAGCAGTTTG AGGGATGCAC GGTAATAAGA ATGGATTTGG ACACTACCAC GGGTAAAAAC
TCTCACGAGG AGATACTCAG GAAATTCAGG GATGACAATA TAAATGTAAT GGTTGGAACC
CAGATGATTG CCAAAGGCCA TGATTTTCCC AACGTTACAC TGGTGGGAGT ACTTGCGGCG
GACAGCATTC TGAACACCGG AGACTACAAA GCGGCGGAAA GGACTTTTCA ACTGCTTACG
CAGGTTGCCG GGAGAGCCGG AAGGGGAACG ATTCCCGGAA GAGTTATAAT CCAGACTTAC
AACACGGACA ACTACAGTAT TGTCTGTGCC TGTGAGCAGG ACTATGTATC TTTTTACAAC
AACGAAATTC TTGTAAGAAA AAATCTTCAG TATCCGCCTT TTATTCATTT GGCATCGGTG
ATACTGAGCG GAGTAAATGA CAAACAGGTG TTAAACAGGG CACTTTTTGT CAAGAATGAA
CTGTGCAGAC ATTTTAAAGA TAATGGTTCA ACGGCACAAA TTTTAGGCCC ATTGAGAGCA
CCATTGGCTA AAATAAAAAA TAAATATAGA TGGAGAATAG TAATAAAATG TGAAGAATCA
GATAAACTTA TAGATGTACT GACAAAAGTT TCAGACGGTT ATTATTCCAA AAGCGCGAAA
AATTCTGTTG CTTTAAGTGT GGATATAAAT CCGGTTAATA TGTTATAA
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| Protein sequence | MNNIASIAIS NTTRKFDKDY HYIIPDKYIG SIVPGMRVIV PFGKSNRLVE GYVLDVLESP
EVSSLKEISR VIDEKPVLKE NMIRLACWMK RQYICTYYDT IKCMLPPGTG VSSTKVVRLK
KCEGGFKGNI KKIIDVLAEC GGEMEYEELK KQVNTKTFAK YINNLKEQGC IEVHEEFTSK
VKEKYVRAVY LAKPWEEVVY DIETNKIKNI KHIRILELLA ENEYIPVGDI VRFVGVSAGV
LDTLKKKGYL EFEDIEVTRD PAANMPYERT LPMKPTQEQQ VVIDRVKSML DSGEFNEVLL
HGITGSGKTE VYLQLIGHCI SMGKQAIVLV PEISLTPQMV NRFKGRFGED VAVMHSRLSL
GERYDQWRLV RDGRTKVVVG ARSAVFAPFD NLGLVIIDEE HESSYKSEIV PKYHAAEIAR
QRCIMENAVL LYGSATPSVE TYYRAKTGEI ELLEMTKRAN NMLLPEVKVV DMRNELNAGN
RSVFSRCLQN EIRKNIDSGQ QTIVFLNRRG YATFILCRNC GYVLKCPYCD VSLTYHSHEE
RVICHYCGFT VKNPEHCPKC KSNHIRNFGT GTQKIEEEVK KQFEGCTVIR MDLDTTTGKN
SHEEILRKFR DDNINVMVGT QMIAKGHDFP NVTLVGVLAA DSILNTGDYK AAERTFQLLT
QVAGRAGRGT IPGRVIIQTY NTDNYSIVCA CEQDYVSFYN NEILVRKNLQ YPPFIHLASV
ILSGVNDKQV LNRALFVKNE LCRHFKDNGS TAQILGPLRA PLAKIKNKYR WRIVIKCEES
DKLIDVLTKV SDGYYSKSAK NSVALSVDIN PVNML
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