Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0556 |
Symbol | |
ID | 4808231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 681871 |
End bp | 683712 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640105970 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001036985 |
Protein GI | 125973075 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.464828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCGGTA TTGCAGGATG GATAAATCTT AAATCAGACT TGACCAATCA AAAAGAAATA TTAAATTCAA TGATTGACAG GCTGACCCCC AGGGGACCCG ATGCATCGGG AAGTTGGATT TCTCCAAATG CGCTTATTGC CCATAAGCGT TTGATAGTTG TCGACCCGGA AGGCGGAATT CAACCCATGG TTCGCAGGCA GGGTGAAAAC ACGTACGTTA TTACATACAA CGGGGAACTT TACAACACTG CGGACCTGCG AAACGAACTT GAATCCAGGG GCCATGAATT TTTAACAAGC TCTGACACGG AAGTTTTACT TGTTTCCTAT ATTGAATGGG GTGCAAAATG TGTCGAACAT CTAAACGGAA TATATGCTTT CGGAATTTGG GATGAAGGAA AAAAGAGGCT TTTTCTGGGA AGGGACAGAT TCGGCGTAAA ACCCCTGTTT TATGCCCAAA GAGGAGATTC TTTGATATTT GGCTCTGAAT TAAAGGCGCT CCTGGCAAAT CCCCTTGTGG AGCCAAAATT GGATGCCGAA GGCTTAGCGG AAATCTTTGC GCTGGGACCC GCCCGAACAC CGGGACACGG TATATTCAAA GATGTTTATG AACTAAAACC CGCTCATTCA ATGATTTTTG ATATAAACGG AATACAGATC AGAAAATACT GGTCGCTGGA AAGTTATCCC CATACCGACA GTGAAAAAGC CACCATATCC AAAGTCAGAG ATTTTGTATT GGATGCCATC ACAAGGCAAC TTGTGGCAGA TGTTCCTGTC TGTACTTTTC TGTCGGGCGG ACTTGATTCA AGTGCCATTA CGGCTGTTGC TTCAAAGACT TTTGCCTCCC AGGGCAAAGG ACAGCTTAAC ACTTTTTCTG TAGATTATGT AGACAATGAC ATTTATTTTA AGCCCAGCAT GTTTCAGCCA AACTCCGATG AACCCTGGAT AAAAAAAATG AGTGAAAGCT TTAATACATG CCATCACTAT GTAAAATTTG ACACACCACA GCTGGTTGAC GCTCTTATTG ACGCTGTAAA GGCACGGGAC CTGCCGGGAA TGGCAGATAT TGACTCATCC CTGTTTCTTT TCTGCCGGGA GGTGAAAAAA TTTTCGGTTG TGGCATTATC CGGTGAATGT GCGGATGAAA TATTCGGAGG ATATCCGTGG TTTCATAATG AGAAAATGCT GTTTGCCGAT ACTTTCCCCT GGTCCGTTTC GGTACACGAA AGGACAAAAA TACTGTCCCC TGAGATTTTG AATTTGATAA AGCCTGAAGA ATACATCCAA AGACGTTATA GAGAAACTCT AAGCGAGGTT CCGCACTTAA AAGGGGAAAA CAGAATTGAA GCCAGAAGAA GAGAAATCTT TTACCTAAAC ATCAACTGGT TCATGGCCAC CTTGCTTGAC AGAAAAGACC GCATGAGTAT GGCATCGGGT CTTGAAGTAA GGGTTCCGTT CTGCGACCAC AGACTGGTCC AATACGTATG GAACATACCA TGGGAGTTGA AAATGTACAA CAAAAGAGAA AAAGGGCTTT TAAGACAGGC TCTAAAAGGC ATACTTCCAG ATGATATAAT TGAGAGAAAG AAAAGCCCAT ACCCGAAAAC TCATAATCCT TCATATAAAA AAGCTGTCAG CAAATGGCTG CTCGAAATAT TAAACGACAG CAGTTCACCT CTTCATCAAT TAATTGACGT AAAAGTGGTA AGGTCCATGG CCGAAGGAAA TTCGGACAAC ACAGATCCCT GGTTCGGCCA GTTGATGGCA CAGCCCCAAA TGCTTGCCTA TCTTATCCAG GTGGATTTTT GGCTGCGGGA TAACCATATA TCAATTGTAT AA
|
Protein sequence | MCGIAGWINL KSDLTNQKEI LNSMIDRLTP RGPDASGSWI SPNALIAHKR LIVVDPEGGI QPMVRRQGEN TYVITYNGEL YNTADLRNEL ESRGHEFLTS SDTEVLLVSY IEWGAKCVEH LNGIYAFGIW DEGKKRLFLG RDRFGVKPLF YAQRGDSLIF GSELKALLAN PLVEPKLDAE GLAEIFALGP ARTPGHGIFK DVYELKPAHS MIFDINGIQI RKYWSLESYP HTDSEKATIS KVRDFVLDAI TRQLVADVPV CTFLSGGLDS SAITAVASKT FASQGKGQLN TFSVDYVDND IYFKPSMFQP NSDEPWIKKM SESFNTCHHY VKFDTPQLVD ALIDAVKARD LPGMADIDSS LFLFCREVKK FSVVALSGEC ADEIFGGYPW FHNEKMLFAD TFPWSVSVHE RTKILSPEIL NLIKPEEYIQ RRYRETLSEV PHLKGENRIE ARRREIFYLN INWFMATLLD RKDRMSMASG LEVRVPFCDH RLVQYVWNIP WELKMYNKRE KGLLRQALKG ILPDDIIERK KSPYPKTHNP SYKKAVSKWL LEILNDSSSP LHQLIDVKVV RSMAEGNSDN TDPWFGQLMA QPQMLAYLIQ VDFWLRDNHI SIV
|
| |