Gene Cthe_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0542 
Symbol 
ID4808291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp662618 
End bp663349 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content40% 
IMG OID640105956 
Producthypothetical protein 
Protein accessionYP_001036971 
Protein GI125973061 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG TCCAGAGCAT ATCCAACGGA ACAAACAGTA TTTCATATAC TCTTACCCGA 
AGCCGAAGGA AAACTGTTGG CATAAGGATA ACGGAAAACG GTGAGGTGAA AGTTGCGGCT
CCTTTGAATA TCCCGGACAG GCAGCTGAAA GATATAATAC TCAAGAAGCT ACCTTGGATT
TTAAGAAAGC AGGAGGAGCT TAGGAAAATA TGTGAAGAAT CTCGGCTTGA AAATAAGTTC
GCGGACGGGG AGACTTTTTT GTATCTTGGA AAGGAATATA CTTTAAGAAT TGCAAAAGGA
GTACTGCCCG AAGGGGTTAA TTTGGAAGAA AACTATATCG TTGTTGCAGC GGACGAGACA
AAAGTCTCTG TGAACGGACC TCAATATATA CGAAATGTTT TAAAGAATTT TTATGTTAAT
CAGTTTGTTG ATATTGCAAA AACAAGGATG GATTTTTTCT CTCCTAAAAT AGGTGTTTGC
CCGCGGAAAT TGACTGTCAG AGAACAAAAG ACCCGCTGGG GAAGCTGTAG CAGCAAGGGT
AATATCAGCC TTAACTGGAA GCTGGTCATG GCTCCGATGG AAGTTATCGA TTATGTTATT
GTGCACGAGC TTTGCCATAT GAAAGAAATG AATCATTCGA AAAATTATTG GAACATTGTA
AAATCCATAA TTCCCGACTT TGAGCTGAGA CGAAAGTGGC TTAAGGACAA CGGCCACCGT
TTGCTAATGT AG
 
Protein sequence
MEKVQSISNG TNSISYTLTR SRRKTVGIRI TENGEVKVAA PLNIPDRQLK DIILKKLPWI 
LRKQEELRKI CEESRLENKF ADGETFLYLG KEYTLRIAKG VLPEGVNLEE NYIVVAADET
KVSVNGPQYI RNVLKNFYVN QFVDIAKTRM DFFSPKIGVC PRKLTVREQK TRWGSCSSKG
NISLNWKLVM APMEVIDYVI VHELCHMKEM NHSKNYWNIV KSIIPDFELR RKWLKDNGHR
LLM