Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_0542 |
Symbol | |
ID | 4808291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 662618 |
End bp | 663349 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640105956 |
Product | hypothetical protein |
Protein accession | YP_001036971 |
Protein GI | 125973061 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG TCCAGAGCAT ATCCAACGGA ACAAACAGTA TTTCATATAC TCTTACCCGA AGCCGAAGGA AAACTGTTGG CATAAGGATA ACGGAAAACG GTGAGGTGAA AGTTGCGGCT CCTTTGAATA TCCCGGACAG GCAGCTGAAA GATATAATAC TCAAGAAGCT ACCTTGGATT TTAAGAAAGC AGGAGGAGCT TAGGAAAATA TGTGAAGAAT CTCGGCTTGA AAATAAGTTC GCGGACGGGG AGACTTTTTT GTATCTTGGA AAGGAATATA CTTTAAGAAT TGCAAAAGGA GTACTGCCCG AAGGGGTTAA TTTGGAAGAA AACTATATCG TTGTTGCAGC GGACGAGACA AAAGTCTCTG TGAACGGACC TCAATATATA CGAAATGTTT TAAAGAATTT TTATGTTAAT CAGTTTGTTG ATATTGCAAA AACAAGGATG GATTTTTTCT CTCCTAAAAT AGGTGTTTGC CCGCGGAAAT TGACTGTCAG AGAACAAAAG ACCCGCTGGG GAAGCTGTAG CAGCAAGGGT AATATCAGCC TTAACTGGAA GCTGGTCATG GCTCCGATGG AAGTTATCGA TTATGTTATT GTGCACGAGC TTTGCCATAT GAAAGAAATG AATCATTCGA AAAATTATTG GAACATTGTA AAATCCATAA TTCCCGACTT TGAGCTGAGA CGAAAGTGGC TTAAGGACAA CGGCCACCGT TTGCTAATGT AG
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Protein sequence | MEKVQSISNG TNSISYTLTR SRRKTVGIRI TENGEVKVAA PLNIPDRQLK DIILKKLPWI LRKQEELRKI CEESRLENKF ADGETFLYLG KEYTLRIAKG VLPEGVNLEE NYIVVAADET KVSVNGPQYI RNVLKNFYVN QFVDIAKTRM DFFSPKIGVC PRKLTVREQK TRWGSCSSKG NISLNWKLVM APMEVIDYVI VHELCHMKEM NHSKNYWNIV KSIIPDFELR RKWLKDNGHR LLM
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