| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_0534 |
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| Symbol | |
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| ID | 4808283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 651489 |
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| End bp | 653672 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640105948 |
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| Product | bacteriocin-processing peptidase |
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| Protein accession | YP_001036963 |
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| Protein GI | 125973053 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01193] ABC-type bacteriocin transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0782715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAGGC GTTTGTTCAA AAAAAAGTAT GTATGCGTAA GGCAATATGA TTTGACAGAC
TGTGGAGCAG CCTGTTTGTC CAGTATTGCC CAATATTACG GGTTAAAAAT GTCCCTTGCA
AAGATACGTG AGATGACAGG CACCGATACC CAGGGCACAA ATGCCTATGG TTTAATTCAT
GCTGCAAAGC AACTGGGGTT TTCAGCAAAA GGTGTTAAGG CCTCAAAAGA GGATTTGCTG
AAAGATTTTA GGCTTCCAGC CATAGCAAAT GTAATTGTTG ACAACAGGCT TGCTCATTTT
GTAGTGATTT ATTCAATTAA AAACAGGATA ATTACGGTTG CCGACCCTGG CAAGGGAATT
GTCAGGTATA GTATGGATGA TTTTTGTTCA ATTTGGACCG GTGGGCTTGT TTTGCTGGAG
CCCGGCGAAG CTTTCCAAAA AGGGGATTAT ACCCAAAATA TGATGGTGAA ATTTGCAGGT
TTTTTGAAGC CTTTAAAAAA AACCGTACTG TGTATATTTT TAGCTTCGCT TTTATATACT
GCTTTAGGAA TTGCAGGCTC CTTTTATATC AAGTTTTTGT TTGACGACCT TATAAAATTT
GAAAAGCTTA ACGACCTTCA TATAATTTCC GCAGGATTTG CTGTTATATT TTTACTTCAG
ATATTTCTTA ATTATTACAG AAGCATACTT GTTACCAAAC TTGGAATGAG CATTGACAAG
TCCATAATGA TGGAGTATTA CTCCCATGTG TTAAAGCTTC CCATGAATTT TTTCAATTCC
AGAAAAGTTG GGGAGATAAT TTCAAGATTT ATGGATGCTT CAAAAATACG ACAGGCAATT
TCCGGAGCAA CCCTTACCAT AATGATTGAT ACAATTATGG CCGTTATCGG AGGAATTCTT
TTATATATAC AAAACTCTTC CCTGTTCTTT ATATCTTTTA TCATCATATT GCTGTACGGA
ATAATTGTGA CGGTGTTTAA CAAACCGATT CAGAATGCTA ACAGGCAAAT AATGGAGGAT
AATGCAAAAT TAACTTCGGC GCTGGTGGAG TCGGTTAAAG GGATTGAGAC GATAAAATCC
TTTGGTGCCG AGGAACAGAC CGAAAAAAGC ACCAGAGACA AAATTGAAAC TGTAATGAAA
AGCTCTTTTA AAGAAGGGAT GCTGTACATA AATCTTTCTT CCCTGACCGG TATTGTTGCC
GGGCTTGGAG GTATTGTAAT ACTCTGGGCC GGTGCATACA ATGTCATAAA GGGAAACATG
AGCGGGGGAC AGCTTCTTGC TTTTAATGCA CTGTTGGCAT ATTTTCTCAC ACCTGTGAAA
AACTTAATTG ATCTTCAGCC GCTTATACAA ACGGCGGTGG TAGCCTCCAA CAGGCTTGGA
GAGATACTTG AACTTGCCAC TGAAAAGGAA CTGAGAGAAG ACAGTGATGA TTTTGTCATA
TCATTAAAAG GAGACATTGA ATTTAGGAAT GTGGATTTTC GCTACGGATT AAGAAAGCCT
GTGCTAAAAA ACATTAATTT AACCATACCA AAAGGGAAAA CGGTAGCCAT AGTAGGTGAG
AGTGGTTCCG GGAAAACTAC TCTGGCAAAG CTTTTGATGA ATTTTTACAG TCCGGAAAAA
GGGGACATTT TGATAAACGG ACACAGTATA AAAAATATAA GTTTGGAGTT GATTAGAAAG
AAAATAGCTT TTGTTTCACA GGATGTCTTT ATTTTCAGTG GTACTGTAAA AGAAAATCTT
TGTCTTGGCA ATGAAAATGT TGATATGGAT GAGATTATAA AAGCGGCTAA AATGGCAAAT
GCCCATGATT TTATAGAAAA ACTGCCCCTA AAATATGATA CTTTTTTGAA TGAAAGCGGA
GCAAATCTTT CCGAAGGGCA AAAACAAAGG CTGGCGATAG CAAGGGCACT GCTTAAAAAA
CCGGATATTT TGATACTCGA CGAGGCAACA AGCAATTTGG ACAGCATCAC CGAAAACCAT
ATCAAGGATG CAATATACGG TTTGGAAGAT GATGTAACGG TTATTATAAT AGCCCACAGG
CTGAGCACAA TAGTAAACTG TGACAAAATA TATCTGCTAA AAGACGGTGA GATAGTGGAG
AGTGGCTCTC ACACCGAGCT TATAGCGTTA AAAGGTTGTT ATTTTAAGAT GTGGAAACAG
ACAGAAAACA CTTTGGCTTC GTAA
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| Protein sequence | MLRRLFKKKY VCVRQYDLTD CGAACLSSIA QYYGLKMSLA KIREMTGTDT QGTNAYGLIH
AAKQLGFSAK GVKASKEDLL KDFRLPAIAN VIVDNRLAHF VVIYSIKNRI ITVADPGKGI
VRYSMDDFCS IWTGGLVLLE PGEAFQKGDY TQNMMVKFAG FLKPLKKTVL CIFLASLLYT
ALGIAGSFYI KFLFDDLIKF EKLNDLHIIS AGFAVIFLLQ IFLNYYRSIL VTKLGMSIDK
SIMMEYYSHV LKLPMNFFNS RKVGEIISRF MDASKIRQAI SGATLTIMID TIMAVIGGIL
LYIQNSSLFF ISFIIILLYG IIVTVFNKPI QNANRQIMED NAKLTSALVE SVKGIETIKS
FGAEEQTEKS TRDKIETVMK SSFKEGMLYI NLSSLTGIVA GLGGIVILWA GAYNVIKGNM
SGGQLLAFNA LLAYFLTPVK NLIDLQPLIQ TAVVASNRLG EILELATEKE LREDSDDFVI
SLKGDIEFRN VDFRYGLRKP VLKNINLTIP KGKTVAIVGE SGSGKTTLAK LLMNFYSPEK
GDILINGHSI KNISLELIRK KIAFVSQDVF IFSGTVKENL CLGNENVDMD EIIKAAKMAN
AHDFIEKLPL KYDTFLNESG ANLSEGQKQR LAIARALLKK PDILILDEAT SNLDSITENH
IKDAIYGLED DVTVIIIAHR LSTIVNCDKI YLLKDGEIVE SGSHTELIAL KGCYFKMWKQ
TENTLAS
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