Gene Cthe_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_0488 
Symbol 
ID4808341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp601605 
End bp602279 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content35% 
IMG OID640105902 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001036919 
Protein GI125973009 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5581] Predicted glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTTA ATGAATTGGG CGTAGGGTTG AAGCTCGAAT TAAAACTTGA AGGTTCGGAT 
GAAAAAAACG GCGATTCTGT CTTTGTCAGC GAATTTGAAT GGGCTGAAAA TGACAGGATA 
ATATATATTG CAGCTCCGAT AAAGGGGGGA AAAATTTACC CTGTCAGTGT CGGTGAAGAA 
CTTGCCATAG TGTTTATAAA AAGCGACAAC CTTTATGAAT TTAAAGGAAA GGTTATTGGC 
AGAGAGGTAA GACATAATAT AAGTCTTTTG CGGGTTGAAA CCTTGTCTGA GATAAGAAAG 
ATACAAAGAC GGGATTTCTT CAGATTTGAT TGTTCAATTC CGATAAGCTA CAGGGTAGTG 
GAAAAGGATA GAATCAATAT ATTACAAAGA AGATTTATAA AGTCATATAC CAGAGATATA 
AGCGGCGGAG GGGTGTGTAT AAGGCTTAAA GAAAGAATCG AGACCGGAGA GCTTCTGGAA 
TGTGAATTGT TCTTGAATGA TTTTAATAAA GTAAGTTTTT TGGGAAGAGT GGTAAGGCTT 
ACAGAATACG ACAGCAAAAA TGATGTTTAT AAATATGAGA TAGGAGTTAA ATTTGAAAAG 
ATTGAGGAAA GAGACAGAGA AAGAATTATA GGATATATAT TTCAGGAACA AAGAAGACTT 
ATAAAAAAGG GTTGA
 
Protein sequence
MRFNELGVGL KLELKLEGSD EKNGDSVFVS EFEWAENDRI IYIAAPIKGG KIYPVSVGEE 
LAIVFIKSDN LYEFKGKVIG REVRHNISLL RVETLSEIRK IQRRDFFRFD CSIPISYRVV 
EKDRINILQR RFIKSYTRDI SGGGVCIRLK ERIETGELLE CELFLNDFNK VSFLGRVVRL 
TEYDSKNDVY KYEIGVKFEK IEERDRERII GYIFQEQRRL IKKG